PXD006325

PXD006325 is an original dataset announced via ProteomeXchange.

Title	A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics
Description	Characterization of proteins critical to fungal cellulosome assembly for Anaeromyces robustus, Neocallimastix californiae and Piromyces finnis (cellulosomes are multi-protein complexes that tether plant biomass degrading enzymes together). These findings suggest that the fungal cellulosome is an independently evolved fungal complex that co-opted useful activities from bacterial neighbors within the herbivore rumen microbiome.
HostingRepository	PRIDE
AnnounceDate	2018-10-19
AnnouncementXML	Submission_2018-10-19_06:45:32.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Anaeromyces; NCBI TaxID: 105135; scientific name: Piromyces sp.; NCBI TaxID: 45796; scientific name: Neocallimastix sp. G-1; NCBI TaxID: 681196;
ModificationList	monohydroxylated residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-04-18 08:29:41	ID requested
⏵ 1	2018-10-19 06:45:33	announced

Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo SJ, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, Hainaut M, Boxma B, van Alen T, Hackstein JHP, Henrissat B, Baker SE, Grigoriev IV, O'Malley MA, A parts list for fungal cellulosomes revealed by comparative genomics. Nat Microbiol, 2():17087(2017) [pubmed]

curator keyword: Biological

submitter keyword: fungi, anaerobic, cellulosomes

Michelle O'Malley
contact affiliation	UC Santa Barbara
contact email	momalley@engineering.ucsb.edu
lab head
Matthew Monroe
contact affiliation	Biological Separations & Mass Spectrometry
contact email	matthew.monroe@pnl.gov
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006325

PRIDE project URI

• PRIDE
  1. PXD006325
     1. Label: PRIDE project
     2. Name: A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics