PXD006320

PXD006320 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Novel proteins and an ancient light-harvesting complex family member are key to algal growth under ocean phosphate limitation
Description	Micromonas implements a sustained non-photochemical quenching response to phosphate limitation, driven by light harvesting family protein LHCSR. This protein, allows stable growth under P-limitation and increased growth without major LCH adjustment as phosphate becomes more available. Proteomics results show this alga integrates unique strategies to optimize growth under dynamic ocean nutrient conditions.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:37:26.632.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD006320
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Matthew Monroe
SpeciesList	scientific name: Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga); NCBI TaxID: 296587;
ModificationList	Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-04-18 06:28:48	ID requested
1	2018-10-22 05:33:38	announced
⏵ 2	2024-10-22 04:37:27	announced	2024-10-22: Updated project metadata.

Publication List

Guo J, Wilken S, Jimenez V, Choi CJ, Ansong C, Dannebaum R, Sudek L, Milner DS, Bachy C, Reistetter EN, Elrod VA, Klimov D, Purvine SO, Wei CL, Kunde-Ramamoorthy G, Richards TA, Goodenough U, Smith RD, Callister SJ, Worden AZ, Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation. Nat Microbiol, 3(7):781-790(2018) [pubmed]
10.6019/PXD006320;
10.1038/s41564-018-0178-7;

Guo J, Wilken S, Jimenez V, Choi CJ, Ansong C, Dannebaum R, Sudek L, Milner DS, Bachy C, Reistetter EN, Elrod VA, Klimov D, Purvine SO, Wei CL, Kunde-Ramamoorthy G, Richards TA, Goodenough U, Smith RD, Callister SJ, Worden AZ, Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation. Nat Microbiol, 3(7):781-790(2018) [pubmed]

10.6019/PXD006320;

10.1038/s41564-018-0178-7;

Keyword List

curator keyword: Biological
submitter keyword: phosphate limitation, LHC,algae

curator keyword: Biological

submitter keyword: phosphate limitation, LHC,algae

Contact List

Alexandra Z. Worden
contact affiliation	Monterey Bay Aquarium Research Institute
contact email	azworden@mbari.org
lab head
Matthew Monroe
contact affiliation	Pacific Northwest National Laboratory
contact email	matthew.monroe@pnnl.gov
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006320
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006320

PRIDE project URI

Repository Record List

[ + ]