PXD006237

PXD006237 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Contrasting Effects of Acclimated Copper Limitation on the Photosynthetic Apparatus in Two Strains of the open ocean diatom Thalassiosira oceanica
Description	The physiological adaptations of diatoms to cope with Cu limitation are largely unknown. In the present study we investigated the response to Cu limitation in two strains of the model open ocean diatom T. oceanica (CCMP 1003 and CCMP 1005), focusing on physiological and proteomic changes in the photosynthetic apparatus. Our results show remarkable differences between the adaptations of TO05 and TO03 to low Cu, highlighting significant intra specific variations.
HostingRepository	PRIDE
AnnounceDate	2017-08-15
AnnouncementXML	Submission_2017-08-15_03:30:54.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jenny Moon
SpeciesList	scientific name: Thalassiosira oceanica; NCBI TaxID: 159749; scientific name: Thalassiosira oceanica CCMP1005; NCBI TaxID: 637379;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap; Bruker Daltonics instrument model

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-04-03 03:24:18	ID requested
⏵ 1	2017-08-15 03:30:55	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: diatom, copper, Cu, photosynthesis
photosystem, intra-specific
proteome, Thalassiosira
LHC, FCP, ETR, PE curve, FRRF

submitter keyword: diatom, copper, Cu, photosynthesis

photosystem, intra-specific

proteome, Thalassiosira

LHC, FCP, ETR, PE curve, FRRF

Contact List

Leonard James Foster
contact affiliation	Michael Smith Laboratories and Biochemistry & Molecular Biology, University of Britich Columbia, Vancouver BC Canada
contact email	foster@msl.ubc.ca
lab head
Jenny Moon
contact affiliation	University of British Columbia
contact email	kyungmee@mail.ubc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/08/PXD006237
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/08/PXD006237

PRIDE project URI

Repository Record List

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