PXD006035 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | On-line desalting of sodium dodecyl sulfate in mass spectrometry |
Description | We tested here the ability of weak cation exchange (WCX) stationary phase to retain positively charged proteinaceous whilst negatively charged SDS molecules can be washed out from the capillary during on-line desalting. This novel chromatographic method named as online desalting of sodium dodecyl sulfate (online deSDS) satisfactorily allows for the first time the unforeseen straightforward LC-MS/MS analysis of SDS-containing samples without the requirement of any additional pre-processing step. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:07:19.541.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Aida Serra |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue |
Instrument | LTQ FT; LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-03-06 06:13:16 | ID requested | |
1 | 2018-06-18 02:04:24 | announced | |
⏵ 2 | 2024-10-22 04:07:26 | announced | 2024-10-22: Updated project metadata. |
Publication List
Serra A, Gallart-Palau X, Dutta B, Sze SK, Online Removal of Sodium Dodecyl Sulfate via Weak Cation Exchange in Liquid Chromatography-Mass Spectrometry Based Proteomics. J Proteome Res, 17(7):2390-2400(2018) [pubmed] |
10.1021/acs.jproteome.8b00156; |
Keyword List
curator keyword: Technical |
submitter keyword: Sodium dodecyl sulfate, WCX, mass spectrometry, weak cation exchange, SDS, LC-MS/MS |
Contact List
Siu Kwan Sze |
contact affiliation | School of Biological Sciences. Nanyang Technological University. 60 Nanyang Drive, Singapore 637551 |
contact email | sksze@ntu.edu.sg |
lab head | |
Aida Serra |
contact affiliation | School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551. |
contact email | aserramaq@ntu.edu.sg |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/06/PXD006035 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD006035
- Label: PRIDE project
- Name: On-line desalting of sodium dodecyl sulfate in mass spectrometry