PXD006035

PXD006035 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	On-line desalting of sodium dodecyl sulfate in mass spectrometry
Description	We tested here the ability of weak cation exchange (WCX) stationary phase to retain positively charged proteinaceous whilst negatively charged SDS molecules can be washed out from the capillary during on-line desalting. This novel chromatographic method named as online desalting of sodium dodecyl sulfate (online deSDS) satisfactorily allows for the first time the unforeseen straightforward LC-MS/MS analysis of SDS-containing samples without the requirement of any additional pre-processing step.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:07:19.541.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Aida Serra
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	LTQ FT; LTQ Orbitrap Velos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-03-06 06:13:16	ID requested
1	2018-06-18 02:04:24	announced
⏵ 2	2024-10-22 04:07:26	announced	2024-10-22: Updated project metadata.

Publication List

Serra A, Gallart-Palau X, Dutta B, Sze SK, Online Removal of Sodium Dodecyl Sulfate via Weak Cation Exchange in Liquid Chromatography-Mass Spectrometry Based Proteomics. J Proteome Res, 17(7):2390-2400(2018) [pubmed]
10.1021/acs.jproteome.8b00156;

Serra A, Gallart-Palau X, Dutta B, Sze SK, Online Removal of Sodium Dodecyl Sulfate via Weak Cation Exchange in Liquid Chromatography-Mass Spectrometry Based Proteomics. J Proteome Res, 17(7):2390-2400(2018) [pubmed]

10.1021/acs.jproteome.8b00156;

Keyword List

curator keyword: Technical
submitter keyword: Sodium dodecyl sulfate, WCX, mass spectrometry, weak cation exchange, SDS, LC-MS/MS

curator keyword: Technical

submitter keyword: Sodium dodecyl sulfate, WCX, mass spectrometry, weak cation exchange, SDS, LC-MS/MS

Contact List

Siu Kwan Sze
contact affiliation	School of Biological Sciences. Nanyang Technological University. 60 Nanyang Drive, Singapore 637551
contact email	sksze@ntu.edu.sg
lab head
Aida Serra
contact affiliation	School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551.
contact email	aserramaq@ntu.edu.sg
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/06/PXD006035
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/06/PXD006035

PRIDE project URI

Repository Record List

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