PXD006011 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Citrus Proteomics: Lemon CLas graft inoculation Week 2 |
Description | Lisbon lemon trees were grafted with budwood infected with the citrus greening bacterium, 'Candidatus Liberibacter asiaticus', or control budwood, and leaf samples were collected every two weeks post graft for LC/MS analysis. This project has shotgun proteomics data for leaf samples from 5 control and 5 CLas grafted trees at the two week post graft timepoint. |
HostingRepository | PRIDE |
AnnounceDate | 2021-09-07 |
AnnouncementXML | Submission_2021-09-07_03:23:04.707.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | John Ramsey |
SpeciesList | scientific name: Citrus hybrid cultivar; NCBI TaxID: 171250; |
ModificationList | monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-03-03 08:20:35 | ID requested | |
⏵ 1 | 2021-09-07 03:23:05 | announced | |
Publication List
Ramsey JS, Chin EL, Chavez JD, Saha S, Mischuk D, Mahoney J, Mohr J, Robison FM, Mitrovic E, Xu Y, Strickler SR, Fernandez N, Zhong X, Polek M, Godfrey KE, Giovannoni JJ, Mueller LA, Slupsky CM, Bruce JE, Heck M, . J Proteome Res, 19(6):2247-2263(2020) [pubmed] |
Keyword List
curator keyword: Biological |
submitter keyword: citrus greening, huanglongbing, 'Candidatus Liberibacter asiaticus', citrus |
Contact List
Michelle Cilia |
contact affiliation | USDA ARS; Boyce Thompson Institute; Cornell University |
contact email | mlc68@cornell.edu |
lab head | |
John Ramsey |
contact affiliation | USDA-ARS |
contact email | jsr47@cornell.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2021/09/PXD006011 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD006011
- Label: PRIDE project
- Name: Citrus Proteomics: Lemon CLas graft inoculation Week 2