PXD006004

PXD006004 is an original dataset announced via ProteomeXchange.

Title	RNA polymerase II Immunoprecipitation from Arabidopsis LC-MSMS
Description	RNA polymerase II (Pol II) was immunoprecipitated from Arabidopsis thaliana seedlings, using antibodies that specifically recognize: 1) C’ terminal Domain (CTD), 2) CTD Serine 5 Phosphorylation and 3) CTD Serine 2 Phosphorylation. Proteins that co-immunoprecipitate with different Pol II pools were analysed.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:07:58.884.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nicolas Nalpas
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: 3702;
ModificationList	phosphorylated residue
Instrument	LTQ Orbitrap XL

Revision	Datetime	Status	ChangeLog Entry
0	2017-03-03 02:04:23	ID requested
1	2018-10-17 00:35:47	announced
⏵ 2	2024-10-22 04:08:03	announced	2024-10-22: Updated project metadata.

Speth C, Szabo EX, Martinho C, Collani S, Zur Oven-Krockhaus S, Richter S, Droste-Borel I, Macek B, Stierhof YD, Schmid M, Liu C, Laubinger S, Arabidopsis RNA processing factor SERRATE regulates the transcription of intronless genes. Elife, 7():(2018) [pubmed]

10.7554/eLife.37078;

curator keyword: Biological

submitter keyword: Arabidopsis, LC-MSMS,Pol II

Sascha Laubinger
contact affiliation	AG Evolutionäre Genetik der Pflanzen Fak. V - Institut für Biologie und Umweltwissenschaften (IBU) Carl von Ossietzky Universität Oldenburg Carl von Ossietzky-Str. 9-11 26111 Oldenburg
contact email	sascha.laubinger@uni-oldenburg.de
lab head
Nicolas Nalpas
contact affiliation	University of Rouen
contact email	nalpas.nicolas@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD006004

PRIDE project URI

• PRIDE
  1. PXD006004
     1. Label: PRIDE project
     2. Name: RNA polymerase II Immunoprecipitation from Arabidopsis LC-MSMS