PXD005944 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | On-bead vs FASP vs InGel sample preparation for LC-MS/MS |
Description | The aim of this project was to compare and optimize sample processing protocols up-stream of LC-MS/MS. We set out to create a protocol that is easier and less laborious to use with liquid handlers than FASP, but that generates comparable results as FASP or traditional in-gel digestion. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:36:15.308.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Krzysztof Sikorski |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-02-21 05:26:54 | ID requested | |
1 | 2018-07-19 03:39:36 | announced | |
⏵ 2 | 2024-10-22 04:36:15 | announced | 2024-10-22: Updated project metadata. |
Publication List
Dataset with its publication pending |
Keyword List
curator keyword: Technical |
submitter keyword: on-bead digestion, GelFree,FASP, LC-MS/MS |
Contact List
Fridtjof Lund-Johansen |
contact affiliation | Dept. of Immunology, Oslo University Hospital Rikshospitalet, Oslo, Norway |
contact email | fridtjol@gmail.com |
lab head | |
Krzysztof Sikorski |
contact affiliation | K.G. Jebsen Center for Cancer Immunotherapy, Oslo, Norway |
contact email | kristof.sikorski@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD005944 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005944
- Label: PRIDE project
- Name: On-bead vs FASP vs InGel sample preparation for LC-MS/MS