PXD005933

PXD005933 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Soybena response to waterlogging
Description	Leaf is sensitive to environmental changes and exhibits specific responses to abiotic stress. To identify the response mechanism in soybean leaf under waterlogging stress, a gel-free/label-free proteomic technique combined with polyethylene glycol fractionation was used.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:36:03.434.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Akiko Hashiguchi
SpeciesList	scientific name: Glycine max; NCBI TaxID: 3847;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-02-20 01:29:43	ID requested
1	2017-07-03 23:48:28	announced
⏵ 2	2024-10-22 04:36:04	announced	2024-10-22: Updated project metadata.

Publication List

Kazemi Oskuei B, Yin X, Hashiguchi A, Bandehagh A, Komatsu S, Proteomic analysis of soybean seedling leaf under waterlogging stress in a time-dependent manner. Biochim Biophys Acta Proteins Proteom, 1865(9):1167-1177(2017) [pubmed]
10.1016/j.bbapap.2017.06.022;

Kazemi Oskuei B, Yin X, Hashiguchi A, Bandehagh A, Komatsu S, Proteomic analysis of soybean seedling leaf under waterlogging stress in a time-dependent manner. Biochim Biophys Acta Proteins Proteom, 1865(9):1167-1177(2017) [pubmed]

10.1016/j.bbapap.2017.06.022;

Keyword List

curator keyword: Biological
submitter keyword: Waterlogging., Soybean,Gel-free/label-free proteomics, Leaf, Time dependency

curator keyword: Biological

submitter keyword: Waterlogging., Soybean,Gel-free/label-free proteomics, Leaf, Time dependency

Contact List

Setsuko Komatsu
contact affiliation	National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan
contact email	komatsu.setsuko.fu@u.tsukuba.ac.jp
lab head
Akiko Hashiguchi
contact affiliation	University of Tsukuba
contact email	hashiguchi.akiko.ge@un.tsukuba.ac.jp
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005933
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005933

PRIDE project URI

Repository Record List

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