<<< Full experiment listing

PXD005924

PXD005924 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleX!Tandem E. coli large vs small database
DescriptionA comparison of the performance when using X!Tandem with a 1) large, exhaustive, reference database; and 2) small, specialized, database.
HostingRepositoryPRIDE
AnnounceDate2017-04-21
AnnouncementXMLSubmission_2017-04-21_01:18:35.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterFredrik Boulund
SpeciesList scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationListNo PTMs are included in the dataset
InstrumentQ Exactive
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-02-14 08:06:20ID requested
12017-04-21 01:18:36announced
Publication List
Boulund F, Karlsson R, Gonzales-Siles L, Johnning A, Karami N, Al-Bayati O, Å, hr, é, n C, Moore ERB, Kristiansson E, Typing and Characterization of Bacteria Using Bottom-up Tandem Mass Spectrometry Proteomics. Mol Cell Proteomics, 16(6):1052-1063(2017) [pubmed]
Keyword List
curator keyword: Technical
submitter keyword: E. coli, database, tandem ms
Contact List
Edward R. B. Moore
contact affiliationUniversity of Gothenburg, Göteborg
contact emailerbmoore@ccug.se
lab head
Fredrik Boulund
contact affiliationChalmers University of Technology
contact emailfredrik.boulund@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/04/PXD005924
PRIDE project URI
Repository Record List
[ + ]