PXD005908

PXD005908 is an original dataset announced via ProteomeXchange.

Title	Proteomic Identification of Cereal Grains Associated with Archaeological Artefacts
Description	The domestication and transmission of cereals is one of the most fundamental components of early farming, but direct evidence of their use in early culinary practices and economies has remained frustratingly elusive. Using analysis of a well-preserved Early Bronze Age wooden container from Switzerland, we propose novel criterial for the identification of cereal residues. Using gas chromatography mass spectrometry (GC-MS), we identified compounds typically associated with plant products, including a series of phenolic lipids (alkylresorcinols) found only at appreciable concentration in wheat and rye bran. The value of these lipids as cereal grain biomarkers were independently corroborated by the presence of macrobotanical remains embedded in the deposit, and wheat and rye endosperm peptides extracted from residue. These findings demonstrate the utility of a lipid-based biomarker for wheat and rye bran and offer a methodological template for future investigations of wider range of archaeological contexts. Alkylresorcinols provide a new tool for residue analysis which can help explore spread and exploitation of cereal grains, a economically fundamental component the advent and spread of farming.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:35:36.103.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD005908
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Jessica Hendy
SpeciesList	scientific name: Triticum aestivum (Wheat); NCBI TaxID: 4565;
ModificationList	Propionamide; Oxidation; Acetyl
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2017-02-10 05:38:42	ID requested
1	2017-08-04 05:00:27	announced
⏵ 2	2024-10-22 04:35:44	announced	2024-10-22: Updated project metadata.

10.1038/s41598-017-06390-x;

10.6019/PXD005908;

Colonese AC, Hendy J, Lucquin A, Speller CF, Collins MJ, Carrer F, Gubler R, K, ü, hn M, Fischer R, Craig OE, New criteria for the molecular identification of cereal grains associated with archaeological artefacts. Sci Rep, 7(1):6633(2017) [pubmed]

curator keyword: Biological

submitter keyword: Cereal, Wheat,Ancient Proteins

Matthew Collins
contact affiliation	BioArCh, University of York, United Kingdom
contact email	matthew.collins@york.ac.uk
lab head
Jessica Hendy
contact affiliation	University of York
contact email	jessica.hendy@york.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/08/PXD005908

PRIDE project URI

• PRIDE
  1. PXD005908
     1. Label: PRIDE project
     2. Name: Proteomic Identification of Cereal Grains Associated with Archaeological Artefacts