PXD005853

PXD005853 is an original dataset announced via ProteomeXchange.

Title	SHOTGUN PROTEOMIC ANALYSIS TO STUDY THE DECREASE OF XENOGRAFT TUMOR GROWTH AFTER ROSEMARY EXTRACT TREATMENT
Description	In the present work, the effects of rosemary extract on xenograft tumor growth has been studied and, for the first time, a shotgun proteomic analysis based on nanoliquid chromatography−tandem mass spectrometry (nano-LC−MS/MS) together with stable isotope dimethyl labeling (DML) has been applied to investigate the global protein changes in vivo.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:36:02.221.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Alberto Valdés
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	4x(2)H labeled dimethylated residue; 2x(13)C,4x(2)H labeled dimethylated residue; acetylated residue; dimethylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-02-06 01:33:39	ID requested
1	2017-04-10 01:32:29	announced
⏵ 2	2024-10-22 04:36:05	announced	2024-10-22: Updated project metadata.

10.1016/j.chroma.2017.03.072;

Vald, é, s A, Garc, í, a-Ca, ñ, as V, P, é, rez-S, á, nchez A, Barraj, ó, n-Catal, á, n E, Ruiz-Torres V, Artemenko KA, Micol V, Bergquist J, Cifuentes A, Shotgun proteomic analysis to study the decrease of xenograft tumor growth after rosemary extract treatment. J Chromatogr A, 1499():90-100(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: mass spectrometry,colon cancer, dimethyl labeling, xenograft mice, rosemary extract, quantitative proteomics

Alejandro Cifuentes
contact affiliation	Laboratory of Foodomics, Institute of Food Science Research (CIAL, CSIC), Calle Nicolás Cabrera 9, 28049 Madrid, Spain
contact email	a.cifuentes@csic.es
lab head
Alberto Valdés
contact affiliation	Department of Chemistry-BMC, Analytical Chemistry, Uppsala University, Uppsala, Sweden
contact email	a.valdes@csic.es
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/04/PXD005853

PRIDE project URI

• PRIDE
  1. PXD005853
     1. Label: PRIDE project
     2. Name: SHOTGUN PROTEOMIC ANALYSIS TO STUDY THE DECREASE OF XENOGRAFT TUMOR GROWTH AFTER ROSEMARY EXTRACT TREATMENT