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PXD005841

PXD005841 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleOsNOA1 functions in a threshold-dependent manner to regulate chloroplast proteins in rice at lower temperatures
DescriptionWhile our earlier microarray analysis identified a number of possible candidate genes, which may be involved in OsNOA1 function (Yang et al., 2011a), a complementary study of the rice proteome profiles under the same condition has the potential to yield new insights into the biological functions of NOA1 and molecular mechanism of NOA1 associated regulation. In this study, we utilized previously-generated OsNOA1 RNAi lines (Yang et al., 2011a) and newly-generated OsNOA1 overexpression lines to further investigate the function and mechanism of NOA1 in rice. Here we report the proteome changes which include important candidate proteins involved in chloroplast ribosome biogenesis and several classes of proteins with significant changes in response to various levels of OsNOA1 under two different temperature conditions. Our results suggest that OsNOA1 can function in a threshold-dependent manner to regulate the biosynthesis of chloroplast proteins in rice at lower temperatures, and this regulation may be achieved via interactions between NOA1 and chloroplast ribosomes.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:35:29.091.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterHan He
SpeciesList scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationListTMT6plex-126 reporter+balance reagent acylated residue; methylthiolated residue; iodoacetamide derivatized residue; deamidated residue
InstrumentLTQ Orbitrap Velos
Dataset History
RevisionDatetimeStatusChangeLog Entry
02017-02-03 04:48:02ID requested
12018-03-02 00:31:01announced
22018-03-21 01:16:55announcedUpdated publication reference for PubMed record(s): 29548275.
32024-10-22 04:35:36announced2024-10-22: Updated project metadata.
Publication List
He H, Yang Q, Shen B, Zhang S, Peng X, OsNOA1 functions in a threshold-dependent manner to regulate chloroplast proteins in rice at lower temperatures. BMC Plant Biol, 18(1):44(2018) [pubmed]
10.1186/s12870-018-1258-9;
Keyword List
curator keyword: Biological
submitter keyword: Quantitative proteomics, Rice, TMT, NOA1, Threshold-dependent,Chloroplast
Contact List
Xin-Xiang Peng
contact affiliationState Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, South China Agricultural University, Guangzhou, China
contact emailxpeng@scau.edu.cn
lab head
Han He
contact affiliationSCAU
contact emailhehanhenry@163.com
dataset submitter
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Dataset FTP location
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PRIDE project URI
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