PXD005834

PXD005834 is an original dataset announced via ProteomeXchange.

Title	Quantitative Analysis of Proteome Modulations in Alveolar Epithelial Type II Cells in Response to Pulmonary Aspergillus fumigatus Infection
Description	We established a new protocol for negative immunomagnetic isolation of murine primary Type II alveolar epithelial cells (AEC II) yielding untouched primary murine AEC II. AEC II were collected from mice 24h after Aspergillus fumigatus or mock infection (9 replicates per experimental group) and analyzed by label-free quantitative proteomics.
HostingRepository	PRIDE
AnnounceDate	2017-10-05
AnnouncementXML	Submission_2017-10-05_03:54:45.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD005834
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Thilo Bracht
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	L-histidine residue; Oxidation; L-proline residue; Carbamidomethyl
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2017-02-02 00:37:00	ID requested
⏵ 1	2017-10-05 03:54:46	announced

Seddigh P, Bracht T, Molinier-Frenkel V, Castellano F, Kniemeyer O, Schuster M, Weski J, Hasenberg A, Kraus A, Poschet G, Hager T, Theegarten D, Opitz CA, Brakhage AA, Sitek B, Hasenberg M, Gunzer M, Infection. Mol Cell Proteomics, 16(12):2184-2198(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: Type II alveolar epithelial cells, Aspergillus fumigatus, Infection, Lung, Aspergillosis, primary cells

Barbara Sitek
contact affiliation	Clinical Proteomics, Medizinisches Proteom-Center, Ruhr-Universität Bochum, Universitätsstraße 150, 44801 Bochum, Germany.
contact email	barbara.sitek@rub.de
lab head
Thilo Bracht
contact affiliation	Clinical Proteomics
contact email	thilo.bracht@rub.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/10/PXD005834

PRIDE project URI

• PRIDE
  1. PXD005834
     1. Label: PRIDE project
     2. Name: Quantitative Analysis of Proteome Modulations in Alveolar Epithelial Type II Cells in Response to Pulmonary Aspergillus fumigatus Infection