PXD005833

PXD005833 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	The Proteomic Fingerprint of Prostate Cancer in Primary Tumors and Recurrent Lymph Node Metastases
Description	We performed a quantitative proteome comparison on formalin-fixed paraffin embedded (FFPE) tissue of metastasized and non-metastasized primary prostate cancer (PCa) and on recurrent lymph node metastases. Comparing these three sample groups, we aimed to identify proteins, that might potentially promote/supress tumor progression or metastasis formation. Proteins were quantified label-free. Proteins with interesting biological functions were followed-up by immunohistochemistry.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:36:07.912.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ann-Kathrin Müller
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-02-02 00:27:11	ID requested
1	2017-12-19 02:43:11	announced
⏵ 2	2024-10-22 04:36:16	announced	2024-10-22: Updated project metadata.

Publication List

M, ü, ller AK, F, ö, ll M, Heckelmann B, Kiefer S, Werner M, Schilling O, Biniossek ML, Jilg CA, Drendel V, Proteomic Characterization of Prostate Cancer to Distinguish Nonmetastasizing and Metastasizing Primary Tumors and Lymph Node Metastases. Neoplasia, 20(2):140-151(2018) [pubmed]
10.1016/j.neo.2017.10.009;

M, ü, ller AK, F, ö, ll M, Heckelmann B, Kiefer S, Werner M, Schilling O, Biniossek ML, Jilg CA, Drendel V, Proteomic Characterization of Prostate Cancer to Distinguish Nonmetastasizing and Metastasizing Primary Tumors and Lymph Node Metastases. Neoplasia, 20(2):140-151(2018) [pubmed]

10.1016/j.neo.2017.10.009;

Keyword List

curator keyword: Biomedical
submitter keyword: Lymph node metastases, shotgun proteomics, immunohistochemistry,Prostate Cancer, label free

curator keyword: Biomedical

submitter keyword: Lymph node metastases, shotgun proteomics, immunohistochemistry,Prostate Cancer, label free

Contact List

Oliver Schilling
contact affiliation	Insitute for Molecular Medicine and Cell Research, University of Freiburg, Germany
contact email	oliver.schilling@mol-med.uni-freiburg.de
lab head
Ann-Kathrin Müller
contact affiliation	Albert-Ludwigs-Universität Freiburg
contact email	muellerannka@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD005833
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD005833

PRIDE project URI

Repository Record List

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