PXD005833 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | The Proteomic Fingerprint of Prostate Cancer in Primary Tumors and Recurrent Lymph Node Metastases |
Description | We performed a quantitative proteome comparison on formalin-fixed paraffin embedded (FFPE) tissue of metastasized and non-metastasized primary prostate cancer (PCa) and on recurrent lymph node metastases. Comparing these three sample groups, we aimed to identify proteins, that might potentially promote/supress tumor progression or metastasis formation. Proteins were quantified label-free. Proteins with interesting biological functions were followed-up by immunohistochemistry. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:36:07.912.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ann-Kathrin Müller |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-02-02 00:27:11 | ID requested | |
1 | 2017-12-19 02:43:11 | announced | |
⏵ 2 | 2024-10-22 04:36:16 | announced | 2024-10-22: Updated project metadata. |
Publication List
M, ü, ller AK, F, ö, ll M, Heckelmann B, Kiefer S, Werner M, Schilling O, Biniossek ML, Jilg CA, Drendel V, Proteomic Characterization of Prostate Cancer to Distinguish Nonmetastasizing and Metastasizing Primary Tumors and Lymph Node Metastases. Neoplasia, 20(2):140-151(2018) [pubmed] |
10.1016/j.neo.2017.10.009; |
Keyword List
curator keyword: Biomedical |
submitter keyword: Lymph node metastases, shotgun proteomics, immunohistochemistry,Prostate Cancer, label free |
Contact List
Oliver Schilling |
contact affiliation | Insitute for Molecular Medicine and Cell Research, University of Freiburg, Germany |
contact email | oliver.schilling@mol-med.uni-freiburg.de |
lab head | |
Ann-Kathrin Müller |
contact affiliation | Albert-Ludwigs-Universität Freiburg |
contact email | muellerannka@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD005833 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005833
- Label: PRIDE project
- Name: The Proteomic Fingerprint of Prostate Cancer in Primary Tumors and Recurrent Lymph Node Metastases