PXD005738

PXD005738 is an original dataset announced via ProteomeXchange.

Title	Membrane proteins of Planctopirus limnophila
Description	Bacteria of the phylum Planctomycetes have been postulated to be the ‘missing link’ between prokaryotes and eukaryotes. Although phylogenetically the Planctomycetes were grouped into Gram-negative bacteria, it has been reported that they have no outer membrane. Here we present 1D-gel-LC/MS/MS based proteomics data of Planctopirus limnophila membraneswhich in combination with super resolution light microscopy, cryo electron tomography and bioinformatics suggest an altered Gram-negative cell plan for Planctopirus limnophila.
HostingRepository	PRIDE
AnnounceDate	2017-04-18
AnnouncementXML	Submission_2017-04-18_08:49:47.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Martin Kucklick
SpeciesList	scientific name: Planctopirus limnophila DSM 3776; NCBI TaxID: 521674;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-18 02:38:15	ID requested
⏵ 1	2017-04-18 08:49:49	announced

Boedeker C, Sch, ü, ler M, Reintjes G, Jeske O, van Teeseling MC, Jogler M, Rast P, Borchert D, Devos DP, Kucklick M, Schaffer M, Kolter R, van Niftrik L, Engelmann S, Amann R, Rohde M, Engelhardt H, Jogler C, Determining the bacterial cell biology of Planctomycetes. Nat Commun, 8():14853(2017) [pubmed]

curator keyword: Biological

submitter keyword: Planctomycetes, 1D-Gel-LC-MS/MS, membrane proteins

Susanne Engelmann
contact affiliation	Professor Dr. Susanne Engelmann, TU Braunschweig, Institut für Mikrobiologie, c/o Helmholtzzentrum für Infektionsforschung, Mikrobielle Proteomik (MPRO), Inhoffenstrasse 7, 38124 Braunschweig, Germany
contact email	Susanne.Engelmann@helmholtz-hzi.de
lab head
Martin Kucklick
contact affiliation	TU Braunschweig Institut für Mikrobiologie Spielmannstr. 7 Germany
contact email	m.kucklick@tu-braunschweig.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/04/PXD005738

PRIDE project URI

• PRIDE
  1. PXD005738
     1. Label: PRIDE project
     2. Name: Membrane proteins of Planctopirus limnophila