PXD005735 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Discovery of potential early colorectal cancer biomarker |
Description | Differential analysis of proteomes originated from early lesion of colorectal cancer and colon control tissue using FFPE-FASPTM and Label free analysis using 2DnanoUPLC separation before analysis on a qTOF synapt HDMS G2 using ion mobility as supplementary separation dimension |
HostingRepository | PRIDE |
AnnounceDate | 2017-03-28 |
AnnouncementXML | Submission_2017-03-28_09:46:53.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Marie-Alice Meuwis |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue |
Instrument | Synapt MS |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2017-01-18 01:43:53 | ID requested | |
⏵ 1 | 2017-03-28 09:46:57 | announced | |
Publication List
Quesada-Calvo F, Massot C, Bertrand V, Longuesp, é, e R, Bl, é, tard N, Somja J, Mazzucchelli G, Smargiasso N, Baiwir D, De Pauw-Gillet MC, Delvenne P, Malaise M, Coimbra Marques C, Polus M, De Pauw E, Meuwis MA, Louis E, OLFM4, KNG1 and Sec24C identified by proteomics and immunohistochemistry as potential markers of early colorectal cancer stages. Clin Proteomics, 14():9(2017) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: human colorectal cancer, early stage, pT1NM, pT2NM, , label free, FFPE-FASP |
Contact List
Edouard LOUIS |
contact affiliation | Hepato-gastroenterology and digestive oncology unit, university Hopsital of Liège and Laboratory of translational gastroenterology GIGA-Research, University of Liège |
contact email | edouard.louis@ulg.ac.be |
lab head | |
Marie-Alice Meuwis |
contact affiliation | university hospital of Liège |
contact email | marie-alice.meuwis@ulg.ac.be |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/03/PXD005735 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005735
- Label: PRIDE project
- Name: Discovery of potential early colorectal cancer biomarker