PXD005735

PXD005735 is an original dataset announced via ProteomeXchange.

Title	Discovery of potential early colorectal cancer biomarker
Description	Differential analysis of proteomes originated from early lesion of colorectal cancer and colon control tissue using FFPE-FASPTM and Label free analysis using 2DnanoUPLC separation before analysis on a qTOF synapt HDMS G2 using ion mobility as supplementary separation dimension
HostingRepository	PRIDE
AnnounceDate	2017-03-28
AnnouncementXML	Submission_2017-03-28_09:46:53.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Marie-Alice Meuwis
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Synapt MS

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-18 01:43:53	ID requested
⏵ 1	2017-03-28 09:46:57	announced

Quesada-Calvo F, Massot C, Bertrand V, Longuesp, é, e R, Bl, é, tard N, Somja J, Mazzucchelli G, Smargiasso N, Baiwir D, De Pauw-Gillet MC, Delvenne P, Malaise M, Coimbra Marques C, Polus M, De Pauw E, Meuwis MA, Louis E, OLFM4, KNG1 and Sec24C identified by proteomics and immunohistochemistry as potential markers of early colorectal cancer stages. Clin Proteomics, 14():9(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: human colorectal cancer, early stage, pT1NM, pT2NM, , label free, FFPE-FASP

Edouard LOUIS
contact affiliation	Hepato-gastroenterology and digestive oncology unit, university Hopsital of Liège and Laboratory of translational gastroenterology GIGA-Research, University of Liège
contact email	edouard.louis@ulg.ac.be
lab head
Marie-Alice Meuwis
contact affiliation	university hospital of Liège
contact email	marie-alice.meuwis@ulg.ac.be
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/03/PXD005735

PRIDE project URI

• PRIDE
  1. PXD005735
     1. Label: PRIDE project
     2. Name: Discovery of potential early colorectal cancer biomarker