PXD005697

PXD005697 is an original dataset announced via ProteomeXchange.

Title	Proteomics of tissue matrix scaffold derived from decellularized mice mammary tissues, LC-MS/MS
Description	This project is intended to identify the compositions of the tissue matrix scaffold (TMS) generated from the extracellular matrix (ECM) of decellularized NON-SCID mice breast tissues (DBT). Since ECM is the physicochemical support for the cells living in the tissue microenvironment, it is important to know the protein contents within the ECM that are critical for extra- and intracellular signaling, cell growth, migration, cell-cell/ECM interactions. The LC-MS/MS data will serve as a foundation for the downstream applications of the TMS system, and be compared with those of the Matrigel mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2018-10-26
AnnouncementXML	Submission_2018-10-26_10:37:00.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD005697
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Weimin Li
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	Deamidated; Oxidation; Carbamidomethyl
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2017-01-12 03:02:08	ID requested
⏵ 1	2018-10-26 10:37:02	announced

Rijal G, Li W, A versatile 3D tissue matrix scaffold system for tumor modeling and drug screening. Sci Adv, 3(9):e1700764(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: Decellularization, breast/mammary tissue, ECM, tissue matrix scaffold, TMS, LC-MS/MS

Weimin Li
contact affiliation	Elson S. Floyd College of Medicine, Washington State University Spokane
contact email	weimin.li@wsu.edu
lab head
Weimin Li
contact affiliation	Washington State University Spokane
contact email	weimin.li@wsu.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD005697

PRIDE project URI

• PRIDE
  1. PXD005697
     1. Label: PRIDE project
     2. Name: Proteomics of tissue matrix scaffold derived from decellularized mice mammary tissues, LC-MS/MS