PXD005614

PXD005614 is an original dataset announced via ProteomeXchange.

Title	Ave1 Homologs in Venturia pirina and Venturia inequalis
Description	This dataset relates to a proteomic analysis of Ave1 homologs in the fungal pathogens Venturia pirina and Venturia inequalis. These species are the cause of scab disease on European pear (Pyrus communis) and apple (Malus pumila). Sample preparation for both V. pirina and V. inequalis was designed to focus on effectors and eliminate host proteins. To do this the fungi were grown in vitro, on cellophane sheets mimicing the growth habit in infected leaves and proteins were extracted using a gentle washing procedure designed to avoid cell wall breakage. LC-MS/MS data was queried against a protein database generated from gene predictions obtained from whole genome sequences of V. pirina and V. inequalis.
HostingRepository	PRIDE
AnnounceDate	2023-11-14
AnnouncementXML	Submission_2023-11-14_08:49:10.040.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ira Cooke
SpeciesList	scientific name: Venturia inaequalis; NCBI TaxID: 5025; scientific name: Venturia pyrina; NCBI TaxID: 415593;
ModificationList	monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Bruker Daltonics HCT Series; ultraflex; LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-21 02:31:18	ID requested
1	2022-03-02 03:06:54	announced
⏵ 2	2023-11-14 08:49:10	announced	2023-11-14: Updated project metadata.

Dataset with its publication pending

curator keyword: Biological

submitter keyword: Venturia inequalis, LC-MSMS, Ave1, Venturia pirina, Effectors

Ira R Cooke
contact affiliation	James Cook University
contact email	ira.cooke@jcu.edu.au
lab head
Ira Cooke
contact affiliation	James Cook University
contact email	ira.cooke@jcu.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2022/03/PXD005614

PRIDE project URI

• PRIDE
  1. PXD005614
     1. Label: PRIDE project
     2. Name: Ave1 Homologs in Venturia pirina and Venturia inequalis