PXD005603

PXD005603 is an original dataset announced via ProteomeXchange.

Title	Protease activities induced in the apoplast of the resistant tomato cultivar Hawaii 7996 in response to Ralstonia solanacearum infection
Description	In the work presented here we aimed to identify the active proteases secreted in the apoplast of the resistant tomato Hawaii 7996 when challenged with R. solanacearum and compared it with that of the susceptible cultivar Marmande. Using ABPP we characterized a variety-specific induction of papain-like cysteine proteases and serine hydrolases.. Altogether this work denotes the importance of novel proteomic approaches –such as ABPP– to provide new insights on old yet elusive questions regarding the molecular basis of resistance to R. solanacearum.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:35:17.200.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Farnusch Kaschani
SpeciesList	scientific name: Ralstonia solanacearum (strain GMI1000) (Pseudomonas solanacearum); NCBI TaxID: 267608; scientific name: Solanum lycopersicum; NCBI TaxID: 4081;
ModificationList	acetylated residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-20 01:52:00	ID requested
1	2018-05-18 02:40:28	announced
⏵ 2	2024-10-22 04:35:25	announced	2024-10-22: Updated project metadata.

Planas-Marqu, è, s M, Bernardo-Faura M, Paulus J, Kaschani F, Kaiser M, Valls M, van der Hoorn RAL, Coll NS, Infection in Susceptible and Tolerant Tomato Lines. Mol Cell Proteomics, 17(6):1112-1125(2018) [pubmed]

10.1074/mcp.ra117.000052;

curator keyword: Biological

submitter keyword: tomato, serine hydrolase,Ralstonia solanacearum, papain-like cysteine protease, disease resistance, proteases, activity-based protein profiling, quantitative proteomics, bacterial wilt

Farnusch Kaschani
contact affiliation	Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
contact email	farnusch.kaschani@uni-due.de
lab head
Farnusch Kaschani
contact affiliation	University Duisburg-Essen
contact email	farnusch.kaschani@uni-due.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/05/PXD005603

PRIDE project URI

• PRIDE
  1. PXD005603
     1. Label: PRIDE project
     2. Name: Protease activities induced in the apoplast of the resistant tomato cultivar Hawaii 7996 in response to Ralstonia solanacearum infection