PXD005582

PXD005582 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomic Analysis of Lysine Succinylation in oryza sativa
Description	By the combination of affinity enrichment and high-resolution LC-MS/MS analysis, large-scale lysine succinylome analysis was performed. Altogether, 742 lysine succinylation sites in 382 protein groups were identified. Intensive bioinformatic analyses were then carried out to annotate those identified lysine succinylated targets in response to drug treatment, including GO annotation, domain annotation, subcellular localization, KEGG pathway annotation, functional cluster analysis, etc. Based on the results, further studies following the lysine succinylome analysis were suggested
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:35:04.417.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jones Macke
SpeciesList	scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationList	succinyl beta-aspartyl anhydride
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-16 01:56:03	ID requested
1	2018-10-26 11:21:08	announced
⏵ 2	2024-10-22 04:35:20	announced	2024-10-22: Updated project metadata.

Publication List

10.1074/mcp.ra119.001426;
10.1038/s41598-017-17756-6;
Meng X, Xing S, Perez LM, Peng X, Zhao Q, Redo, ñ, a ED, Wang C, Peng Z, Proteome-wide Analysis of Lysine 2-hydroxyisobutyrylation in Developing Rice (Oryza sativa) Seeds. Sci Rep, 7(1):17486(2017) [pubmed]
Meng X, Mujahid H, Zhang Y, Peng X, Redo, ñ, a ED, Wang C, Peng Z, Comprehensive Analysis of the Lysine Succinylome and Protein Co-modifications in Developing Rice Seeds. Mol Cell Proteomics, 18(12):2359-2372(2019) [pubmed]

10.1074/mcp.ra119.001426;

10.1038/s41598-017-17756-6;

Meng X, Xing S, Perez LM, Peng X, Zhao Q, Redo, ñ, a ED, Wang C, Peng Z, Proteome-wide Analysis of Lysine 2-hydroxyisobutyrylation in Developing Rice (Oryza sativa) Seeds. Sci Rep, 7(1):17486(2017) [pubmed]

Meng X, Mujahid H, Zhang Y, Peng X, Redo, ñ, a ED, Wang C, Peng Z, Comprehensive Analysis of the Lysine Succinylome and Protein Co-modifications in Developing Rice Seeds. Mol Cell Proteomics, 18(12):2359-2372(2019) [pubmed]

Keyword List

submitter keyword: oryza sativa succinylation

submitter keyword: oryza sativa succinylation

Contact List

Xiaoxi Meng
contact affiliation	Department of Biochemistry, Molecular Biology, Entomology & Plant Pathology
contact email	xm56@msstate.edu
lab head
Jones Macke
contact affiliation	company
contact email	xiaojun_peng@ptm-biolab.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD005582
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD005582

PRIDE project URI

Repository Record List

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