PXD005574

PXD005574 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomics on preterm infant stool
Description	Development of the gut microbiota is greatly impacted in preterm infants. Despite increasing knowledge about microbiota composition in preterm infants, knowledge about the functional signatures of the intestinal microbiota remains limited. The aim was to study transitions in microbiota activity during the first six postnatal weeks in ten preterm infants. A total of 64 stool samples were measured by LC-MS/MS.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:34:50.935.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Bacteria; NCBI TaxID: 2;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-15 07:11:58	ID requested
1	2017-07-14 00:54:12	announced
⏵ 2	2024-10-22 04:34:59	announced	2024-10-22: Updated project metadata.

Publication List

10.1074/mcp.RA117.000102;
Zwittink RD, van Zoeren-Grobben D, Martin R, van Lingen RA, Groot Jebbink LJ, Boeren S, Renes IB, van Elburg RM, Belzer C, Knol J, Metaproteomics reveals functional differences in intestinal microbiota development of preterm infants. Mol Cell Proteomics, 16(9):1610-1620(2017) [pubmed]

10.1074/mcp.RA117.000102;

Zwittink RD, van Zoeren-Grobben D, Martin R, van Lingen RA, Groot Jebbink LJ, Boeren S, Renes IB, van Elburg RM, Belzer C, Knol J, Metaproteomics reveals functional differences in intestinal microbiota development of preterm infants. Mol Cell Proteomics, 16(9):1610-1620(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: Preterm infant, Metaproteomics, Microbiota, Stool

curator keyword: Biological

submitter keyword: Preterm infant, Metaproteomics, Microbiota, Stool

Contact List

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005574
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005574

PRIDE project URI

Repository Record List

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