PXD005556

PXD005556 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Mouse retina LC-MSMS - Diurnal expression of proteins in the retina of the blind cone-rod homeobox (Crx(-/-) ) mouse and the 129/Sv mouse: a proteomic study
Description	To investigate the role of the circadian clock of the photoreceptor cells in regulation of retinal protein rhythms, we have analyzed diurnal protein expression in the photoreceptor-deficient cone-rod homeobox knock out mouse (Crx-/-). Retinal homogenates of 129/sv and Crx-/- mice were analysed by 2D-PAGE. Differentially expressed spots were in-gel digested with trypsin and identified by LC-MS/MS. Data were used to search the Swiss-Prot protein database.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:34:51.715.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Bent Honoré
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Q-Tof Premier

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-13 02:57:04	ID requested
1	2017-04-04 03:13:54	announced
⏵ 2	2024-10-22 04:34:59	announced	2024-10-22: Updated project metadata.

Publication List

10.1111/aos.13429;
M, ø, ller M, Rath MF, Ludvigsen M, Honor, é B, Vorum H, ) mouse and the 129/Sv mouse: a proteomic study. Acta Ophthalmol, 95(7):717-726(2017) [pubmed]

10.1111/aos.13429;

M, ø, ller M, Rath MF, Ludvigsen M, Honor, é B, Vorum H, ) mouse and the 129/Sv mouse: a proteomic study. Acta Ophthalmol, 95(7):717-726(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: LC-MSMS, Retina,Mouse, 2D-PAGE

curator keyword: Biological

submitter keyword: LC-MSMS, Retina,Mouse, 2D-PAGE

Contact List

Bent Honoré
contact affiliation	Department of Biomedicine, Aarhus University, Arhus, Denmark
contact email	bh@biomed.au.dk
lab head
Bent Honoré
contact affiliation	Department of Biomedicine
contact email	bh@biokemi.au.dk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/04/PXD005556
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/04/PXD005556

PRIDE project URI

Repository Record List

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