PXD005532

PXD005532 is an original dataset announced via ProteomeXchange.

Title	Mixed colonies of Aspergillus niger and Aspergillus oryzae cooperatively degrading wheat bran
Description	A. niger and A. oryzae are two filamentous fungi widely used in industry to produce various enzymes (e.g. pectinases, amylases) and metabolites (e.g. citric acid). Using proteomics, the co-cultivation of these two fungi in wheat bran showed an equal distribution of the two strains forming mixed colonies with a broad range of carbohydrate active enzymes produced. This stable mixed microbial system seems suitable for subsequent commercial processes such as enzyme production. XlnR knock-out strains for both aspergilli were used to study the influence of plant cell wall degrading enzyme production on the fitness of the mixed culture.
HostingRepository	PRIDE
AnnounceDate	2017-02-27
AnnouncementXML	Submission_2017-02-27_08:55:33.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sjef Boeren
SpeciesList	scientific name: Aspergillus oryzae var. oryzae; NCBI TaxID: 90341; scientific name: Aspergillus niger; NCBI TaxID: 5061;
ModificationList	deamidated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2016-12-09 02:17:55	ID requested
⏵ 1	2017-02-27 08:55:35	announced

Benoit-Gelber I, Gruntjes T, Vinck A, van Veluw JG, W, ö, sten HAB, Boeren S, Vervoort JJM, de Vries RP, Mixed colonies of Aspergillus niger and Aspergillus oryzae cooperatively degrading wheat bran. Fungal Genet Biol, 102():31-37(2017) [pubmed]

curator keyword: Biological

submitter keyword: Fungus

Aspergillus

Protein production

mixed culture

XlnR

Sjef Boeren
contact affiliation	Wageningen University
contact email	sjef.boeren@wur.nl
lab head
Sjef Boeren
contact affiliation	Biochemistry
contact email	sjef.boeren@wur.nl
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/02/PXD005532

PRIDE project URI

• PRIDE
  1. PXD005532
     1. Label: PRIDE project
     2. Name: Mixed colonies of Aspergillus niger and Aspergillus oryzae cooperatively degrading wheat bran