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PXD005491

PXD005491 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleNa2CO3-responsive proteins in chloroplasts from Puccinellia tenuiflora leaves
DescriptionAs the organelles in which photosynthesis occurs, chloroplasts are extremely susceptible to saline-alkali stress. Proteins from chloroplast were identified and quantified by isobaric tags for relative and absolute quantification (iTRAQ) strategy, and searched with both of Uniprot Liliposida database and NCBInr database. In each of the labeling experiments, approximately 700 proteins were identified, and 121 abundance changed proteins were identified in chloroplast under the condition of Na2CO3 treatment. While according to the subcellular localization prediction, 102 chloroplast localization abundance changed proteins were used for further analysis of the responsive mechanism of the chloroplast under the conditions of Na2CO3 treatment. The 102 proteins were classified into nine functional categories, including photosynthesis, energy metabolism, other metabolisms, stress and defense, membrane and transporting, signaling, chloroplast structure, gene expression, protein synthesis and folding, and miscellaneous. The abundance patterns of these proteins highlight the Na2CO3-responsive chloroplast structure modulation and a series of photosynthetic regulatory mechanisms, such as thermal dissipation, state transition, cyclic electron transport, photorespiration, repair of photodamaged PSII, alteration of PSI activity, and ROS homeostasis.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_05:25:15.375.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterShaojun Dai
SpeciesList scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationListNo PTMs are included in the dataset
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-12-03 08:03:07ID requested
12021-09-08 06:49:55announced
22024-10-22 05:25:16announced2024-10-22: Updated project metadata.
Publication List
10.1016/j.gpb.2018.10.011;
Suo J, Zhang H, Zhao Q, Zhang N, Zhang Y, Li Y, Song B, Yu J, Cao J, Wang T, Luo J, Guo L, Ma J, Zhang X, She Y, Peng L, Ma W, Guo S, Miao Y, Chen S, Qin Z, Dai S, -responsive Photosynthetic and ROS Scavenging Mechanisms in Chloroplasts of Alkaligrass Revealed by Phosphoproteomics. Genomics Proteomics Bioinformatics, 18(3):271-288(2020) [pubmed]
Keyword List
curator keyword: Biological
submitter keyword: Na2CO3, Chloroplasts, Puccinellia tenuiflora, Proteomics
Contact List
Shaojun Dai
contact affiliationAlkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China
contact email735425617@qq.com
lab head
Shaojun Dai
contact affiliationNEFU
contact email735425617@qq.com
dataset submitter
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Dataset FTP location
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