PXD005459

PXD005459 is an original dataset announced via ProteomeXchange.

Title	Comprehensive proteomic analysis of Penicillium verrucosum
Description	In the present study we used OTA producing Penicillium verrucosum to identify and quantify proteins of an organism with yet no protein information available. We were able to identify 3632 proteins in an "ab initio" translated database from DNA sequences of P. verrucosum. Additionally a SWATH analysis was done to find differentially regulated proteins at two different time points of the growth curve. We compared the proteins at the beginning and the end of the log phase.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:34:13.686.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Katharina Nöbauer
SpeciesList	scientific name: Penicillium verrucosum; NCBI TaxID: 60171;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue; deamidated residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-29 02:08:02	ID requested
1	2017-03-16 03:27:04	announced
⏵ 2	2024-10-22 04:34:14	announced	2024-10-22: Updated project metadata.

N, ö, bauer K, Hummel K, Mayrhofer C, Ahrens M, Setyabudi FMC, Schmidt-Heydt M, Eisenacher M, Razzazi-Fazeli E, Comprehensive proteomic analysis of Penicillium verrucosum. Proteomics, 17(9):(2017) [pubmed]

10.1002/pmic.201600467;

submitter keyword: shotgun proteomics, SWATH, fungal proteomics,Penicillium verrucosum

Ebrahim Razzazi-Fazeli
contact affiliation	VetCore Facility for Research, Proteomics Unit, University of Veterinary Medicine Vienna, Veterinärplatz 1, 1210 Wien
contact email	ebrahim.razzazi@vetmeduni.ac.at
lab head
Katharina Nöbauer
contact affiliation	Austria
contact email	katharina.noebauer@vetmeduni.ac.at
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/03/PXD005459

PRIDE project URI

• PRIDE
  1. PXD005459
     1. Label: PRIDE project
     2. Name: Comprehensive proteomic analysis of Penicillium verrucosum