PXD005451

PXD005451 is an original dataset announced via ProteomeXchange.

Title	Effect of ploidy on Salmon physiology - White muscle
Description	This study investigated firstly, the impact of ploidy on growth performance and whole body composition of Atlantic salmon at different early freshwater stages (34 dph (days post-hatching) alevin; 109 dph; fry and 162 dph parr;) and secondly, whether phenotypic differences at these stages were reflected in protein samples collected from whole fish, white muscle or liver tissue. Female diploid and triploid Atlantic salmon (n = 3) were first fed at 35 dph and then maintained by feeding to satiation on commercial feeds. NOTE on file nomenclature - T/D refer to triploid/diploid; E* refers to sequential protein extract (1 or 2) and S3 refers to sampling time point #3 (all other files with either no suffix or long suffix are sampling time point #2)
HostingRepository	PRIDE
AnnounceDate	2017-12-14
AnnouncementXML	Submission_2017-12-14_00:17:26.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Richard Wilson
SpeciesList	scientific name: Atlantic salmon; NCBI TaxID: 8030;
ModificationList	iodoacetamide derivatized residue
Instrument	LTQ Orbitrap

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-28 02:27:34	ID requested
⏵ 1	2017-12-14 00:17:27	announced

Nuez-Ort, í, n WG, Carter CG, Wilson R, Cooke IR, Amoroso G, Cobcroft JM, Nichols PD, Triploid Atlantic salmon shows similar performance, fatty acid composition and proteome response to diploids during early freshwater rearing. Comp Biochem Physiol Part D Genomics Proteomics, 22():67-77(2017) [pubmed]

curator keyword: Biological

submitter keyword: Salmon, Muscle, Ploidy

Dr Richard Wilson
contact affiliation	Facility manager, Senior research fellow
contact email	richard.wilson@utas.edu.au
lab head
Richard Wilson
contact affiliation	University of Tasmania
contact email	richard.wilson@utas.edu.au
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/12/PXD005451

PRIDE project URI

• PRIDE
  1. PXD005451
     1. Label: PRIDE project
     2. Name: Effect of ploidy on Salmon physiology - White muscle