PXD005444

PXD005444 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative proteomic profiling of fibroblasts in oesophageal adenocarcinoma
Description	The accumulatiob of cancer-associated fibroblasts in tumours correlates with poor prognosis across cancer types including oesophageal adenocarcinoma. In this study we examined the proteomic profile of cancer-associated fibroblasts compared to normal fibroblasts.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:34:05.770.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Antigoni Manousopoulou
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; deaminated residue; monohydroxylated residue
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-25 01:56:04	ID requested
1	2018-08-13 09:32:22	announced
⏵ 2	2024-10-22 04:34:08	announced	2024-10-22: Updated project metadata.

Publication List

Manousopoulou A, Hayden A, Mellone M, Garay-Baquero DJ, White CH, Noble F, Lopez M, Thomas GJ, Underwood TJ, Garbis SD, Quantitative proteomic profiling of primary cancer-associated fibroblasts in oesophageal adenocarcinoma. Br J Cancer, 118(9):1200-1207(2018) [pubmed]
10.1038/s41416-018-0042-9;

Manousopoulou A, Hayden A, Mellone M, Garay-Baquero DJ, White CH, Noble F, Lopez M, Thomas GJ, Underwood TJ, Garbis SD, Quantitative proteomic profiling of primary cancer-associated fibroblasts in oesophageal adenocarcinoma. Br J Cancer, 118(9):1200-1207(2018) [pubmed]

10.1038/s41416-018-0042-9;

Keyword List

curator keyword: Biological, Biomedical
submitter keyword: LC-MS, proteomics, cancer associated fibroblasts

curator keyword: Biological, Biomedical

submitter keyword: LC-MS, proteomics, cancer associated fibroblasts

Contact List

Spiros D. Garbis
contact affiliation	University of Southampton
contact email	S.D.Garbis@soton.ac.uk
lab head
Antigoni Manousopoulou
contact affiliation	Proteas Bioanalytics Inc.
contact email	Antigoni.Manousopoulou@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/08/PXD005444
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/08/PXD005444

PRIDE project URI

Repository Record List

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