PXD005442

PXD005442 is an original dataset announced via ProteomeXchange.

Title	The proteome of Fibrobacter succinogenes S85 outer membrane vesicles
Description	Here, we illustrate the proteomic composition and hydrolytic capacity of outer membrane vesicles (OMVs) produced by F. succinogenes during growth on Avicel cellulose and show that the OMVs are equipped with a highly versatile polysaccharide-degrading machinery. Proteomic assessment identified an enrichment of acidic proteins as well as carbohydrate-active enzymes of varying putative functions. Further, we show that the OMVs contain a membrane-bound multiprotein complex containing four proteins.
HostingRepository	PRIDE
AnnounceDate	2017-06-30
AnnouncementXML	Submission_2017-06-30_02:14:32.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Magnus Arntzen
SpeciesList	scientific name: Fibrobacter succinogenes subsp. succinogenes S85; NCBI TaxID: 59374;
ModificationList	2-pyrrolidone-5-carboxylic acid (Gln); monohydroxylated residue; acetylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-25 01:48:29	ID requested
⏵ 1	2017-06-30 02:14:33	announced

Arntzen M Ø, V, á, rnai A, Mackie RI, Eijsink VGH, Pope PB, Outer membrane vesicles from Fibrobacter succinogenes S85 contain an array of carbohydrate-active enzymes with versatile polysaccharide-degrading capacity. Environ Microbiol, 19(7):2701-2714(2017) [pubmed]

curator keyword: Biological

submitter keyword: outer membrane vesicles, OMV, hydrolytic enzymes

Vincent Eijsink
contact affiliation	Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway
contact email	vincent.eijsink@nmbu.no
lab head
Magnus Arntzen
contact affiliation	Norwegian University of Life Sciences
contact email	magnus.arntzen@nmbu.no
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/06/PXD005442

PRIDE project URI

• PRIDE
  1. PXD005442
     1. Label: PRIDE project
     2. Name: The proteome of Fibrobacter succinogenes S85 outer membrane vesicles