PXD005425

PXD005425 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	RNF4-knockdown and RNF4-TULIP identified proteins
Description	In this project we aim to identify the spacific targets of the SUMO-Targeted Ubiquitin Ligase (STUBL) RNF4. For that, we combine the study of SUMOylation targets that are enriched after RNF4 knockdown with the use of Targeted Ubiquitin Ligases Identified by Proteomics (TULIP).
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:41:08.262.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Román González-Prieto
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-23 01:25:29	ID requested
1	2017-11-23 01:58:48	announced
2	2017-12-11 04:19:11	announced	Updated publication reference for PubMed record(s): 29180619.
⏵ 3	2024-10-22 04:41:13	announced	2024-10-22: Updated project metadata.

Publication List

10.1038/s41467-017-01900-x;
Kumar R, Gonz, á, lez-Prieto R, Xiao Z, Verlaan-de Vries M, Vertegaal ACO, The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery. Nat Commun, 8(1):1809(2017) [pubmed]

10.1038/s41467-017-01900-x;

Kumar R, Gonz, á, lez-Prieto R, Xiao Z, Verlaan-de Vries M, Vertegaal ACO, The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery. Nat Commun, 8(1):1809(2017) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: SUMO, RNF4, Ubiquitin

curator keyword: Biological

submitter keyword: SUMO, RNF4, Ubiquitin

Contact List

Alfred CO Vertegaal
contact affiliation	Associate Proffesor Department of Molecular Cell Biology Leiden University Medical Centre Leiden The Netherlands
contact email	A.C.O.Vertegaal@lumc.nl
lab head
Román González-Prieto
contact affiliation	Andalusian Center for Regenerative Medicine and Cell Biology, CABIMER, University of Seville
contact email	R.Gonzalez_Prieto@lumc.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/11/PXD005425
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/11/PXD005425

PRIDE project URI

Repository Record List

[ + ]