PXD005317 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | The diurnal liver acetylome is regulated by circadian and feeding rhythms-orchestrated deacetylation - total mouse liver extract |
Description | Acetylation of lysine is involved in various biological processes and is considered as a key reversible post-translational modification (PTM) in the regulation of gene expression, enzyme activity, protein-protein interaction, and subcellular localization. This PTM is therefore highly relevant in the context of circadian biology but its characterization at the genome wide scale and its clock-dependent or -independent regulation is still poorly characterized. Here we used in vivo stable isotope labeling by amino acids (SILAC) coupled with an enrichment of acetylated-lysine-containing peptides to provide a comprehensive and rhythmic acetylome map of the liver. |
HostingRepository | PRIDE |
AnnounceDate | 2017-08-02 |
AnnouncementXML | Submission_2017-08-22_03:24:18.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Loïc Dayon |
SpeciesList | scientific name: Mus musculus (Mouse); NCBI TaxID: 10090; |
ModificationList | 6x(13)C labeled residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | LTQ Orbitrap Elite |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-11-11 00:21:05 | ID requested | |
1 | 2017-08-02 09:48:31 | announced | |
⏵ 2 | 2017-08-22 03:24:19 | announced | Updated publication reference for PubMed record(s): 28813682. |
Publication List
Mauvoisin D, Atger F, Dayon L, N, ú, ñ, ez Galindo A, Wang J, Martin E, Da Silva L, Montoliu I, Collino S, Martin FP, Ratajczak J, Cant, ó C, Kussmann M, Naef F, Gachon F, Circadian and Feeding Rhythms Orchestrate the Diurnal Liver Acetylome. Cell Rep, 20(7):1729-1743(2017) [pubmed] |
Keyword List
curator keyword: Biological, Biomedical |
submitter keyword: Mouse, Liver, Circadian clock, Acetylation, Acetylome, Metabolism, SIRT3, NAD+ |
Contact List
Frédéric Gachon |
contact affiliation | Diabetes and Circadian Rhythms Department, Nestlé Institute of Health Sciences, CH-1015 Lausanne, Switzerland |
contact email | frederic.gachon@rd.nestle.com |
lab head | |
Loïc Dayon |
contact affiliation | Nestlé Institute of Health Sciences SA |
contact email | loic.dayon@rd.nestle.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005317
- Label: PRIDE project
- Name: The diurnal liver acetylome is regulated by circadian and feeding rhythms-orchestrated deacetylation - total mouse liver extract