PXD005245

PXD005245 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteomic analysis of glioblastoma subpopulations
Description	Three glioblastoma subpopulations were analyzed by quantitative proteomics, using dimethyl labeling approach. Deconvolution of mixture spectra using SuperQuant software was employed to increase the depth of quantification.
HostingRepository	PRIDE
AnnounceDate	2018-03-08
AnnouncementXML	Submission_2018-03-08_00:19:41.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vladimir Gorshkov
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	2x(13)C: 4x(2)H labeled dimethylated residue; 4x(2)H labeled dimethylated residue; dimethylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion ETD

Revision	Datetime	Status	ChangeLog Entry
0	2016-11-01 03:02:08	ID requested
⏵ 1	2018-03-08 00:19:42	announced

Verano-Braga T, Gorshkov V, Munthe S, S, ø, rensen MD, Kristensen BW, Kjeldsen F, SuperQuant-assisted comparative proteome analysis of glioblastoma subpopulations allows for identification of potential novel therapeutic targets and cell markers. Oncotarget, 9(10):9400-9414(2018) [pubmed]

curator keyword: Biomedical

submitter keyword: cancer, glioblastoma, shotgun proteomics, LCMS, SuperQuant

Frank Kjeldsen
contact affiliation	Professor, Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense, Denmark
contact email	frankk@bmb.sdu.dk
lab head
Vladimir Gorshkov
contact affiliation	University of Southern Denmark
contact email	vgor@bmb.sdu.dk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/03/PXD005245

PRIDE project URI

• PRIDE
  1. PXD005245
     1. Label: PRIDE project
     2. Name: Quantitative proteomic analysis of glioblastoma subpopulations