PXD005201

PXD005201 is an original dataset announced via ProteomeXchange.

Title	Analysis of the cilia membrane proteome by cmAPEX
Description	APEX was targeted to the primary cilium of mouse IMCD cells using a 5HT6-APEX-GFP fusion construct. Proximity labling was performed using incubation with biotinphenol and H2O2. For details, please see the methods section of the accompanying paper.
HostingRepository	PRIDE
AnnounceDate	2017-07-18
AnnouncementXML	Submission_2017-07-18_00:36:37.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Markus Rinschen
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	biotinylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-10-20 23:51:56	ID requested
⏵ 1	2017-07-18 00:36:38	announced

Kohli P, H, ö, hne M, J, ü, ngst C, Bertsch S, Ebert LK, Schauss AC, Benzing T, Rinschen MM, Schermer B, The ciliary membrane-associated proteome reveals actin-binding proteins as key components of cilia. EMBO Rep, 18(9):1521-1535(2017) [pubmed]

curator keyword: Biological

submitter keyword: Mouse, Cilia, Proteome, Proximity Labeling

Bernhard Schermer
contact affiliation	University of Cologne
contact email	bernhard.schermer@uk-koeln.de
lab head
Markus Rinschen
contact affiliation	Kidney research center cologne
contact email	markus.rinschen@uk-koeln.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005201

PRIDE project URI

• PRIDE
  1. PXD005201
     1. Label: PRIDE project
     2. Name: Analysis of the cilia membrane proteome by cmAPEX