PXD005159
PXD005159 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | HeLa standard shotgun DDA analysis using a two-meter C18 monolithic silica column |
Description | Human HeLa proteome analysis by a nanoLC-MS/MS system using a two-meter C18 monolithic silica column under shallow gradient conditions without pre-fractionation was performed in this project. A hybrid quadrupole-orbitrap mass spectrometer (Thermo Q-Exactive) was used to analyze a tryptic digest of HeLa cells through this study. Identification results were filtered at 1% false discovery rate (FDR) thresholds by searching against a randomized decoy database using Mascot at peptide and protein levels. |
HostingRepository | jPOST |
AnnounceDate | 2016-10-17 |
AnnouncementXML | Submission_2022-09-18_02:58:30.069.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD005159 |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Saki Nambu |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | S-carboxymethyl-L-cysteine; L-methionine sulfoxide |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2016-10-16 11:00:49 | ID requested | |
1 | 2016-10-16 19:22:57 | announced | |
2 | 2016-11-17 18:12:39 | announced | Updated description. |
3 | 2017-03-30 23:33:44 | announced | Updated Repository support. |
4 | 2017-03-31 00:09:03 | announced | Updated DigitalObjectIdentifier. |
5 | 2018-09-18 23:39:54 | announced | Updated CV, FTP location and Modification list. |
6 | 2021-02-04 17:07:11 | announced | 2021-02-04: Updated FTP location. |
⏵ 7 | 2022-09-18 02:58:30 | announced | 2022-09-18: Updated FTP location. |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Monolithic silica column, HeLa cell |
Contact List
Yasushi Ishihama | |
---|---|
lab head | |
Saki Nambu | |
contact affiliation | Kyoto university |
dataset submitter |
Full Dataset Link List
jPOST dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000200/ |