PXD005126

PXD005126 is an original dataset announced via ProteomeXchange.

Title	Proteome data on the microbial microbiome of grasshopper feces
Description	For phytophagous insects, the efficiency of utilization of hemicellulose and cellulose depends on the gut microbiota. Shifts in environmental and management conditions alter the presence and abundance of plant species which may induce adaptations in the diversity of gut microbiota. To test the adaptation of the microbiota to a shift from a natural diverse to a monocultural meadow with Dactylis glomerata the highly abundant grasshopper species, Chorthippus dorsatus, was taken from the wild and kept in captivity and were fed with Dactylis glomerata for five days. The feces were collected and analyzed by metaproteomics. After the diet shift from a diverse source to the single source, the microbiota composition stays relatively stable. The Bacilli as the group of highest abundance did not change on the functional level. In contrast, pronounced shifts of amino acid and carbohydrate metabolism in Clostridia and Proteobacteria were observed. Hence, the adaptation upon short-term change of food source in this grasshopper species is dominated by functional adaptations and not by shifts in the community structure of the microbiota. This suggests that the microbiota of grasshoppers is capable to cope also with the loss of diverse feeding plants at least for a shorter time period.
HostingRepository	PRIDE
AnnounceDate	2017-10-24
AnnouncementXML	Submission_2017-10-24_05:42:34.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Nico Jehmlich
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-10-10 08:04:10	ID requested
1	2017-01-02 05:58:27	announced
⏵ 2	2017-10-24 05:42:35	announced	Updated project metadata.

Jehmlich N, M, ü, ller M, Meyer S, Tischer A, Potthast K, Michalzik B, von Bergen M, Proteome data on the microbial microbiome of grasshopper feces. Data Brief, 9():1147-1154(2016) [pubmed]

curator keyword: Biological

submitter keyword: Metaproteomics, feces, grasshoppers

Martin von Bergen
contact affiliation	Prof. Dr. Martin von Bergen Head of Department of Molecular Systems Biology Helmholtz-Zentrum für Umweltforschung GmbH - UFZ Helmholtz Centre for Environmental Research GmbH - UFZ Permoserstraße 15, 04318 Leipzig, Germany Phone +49 341 235 1211 Martin.vonbergen@ufz.de, http://www.ufz.de/index.php?de=40881
contact email	martin.vonbergen@ufz.de
lab head
Nico Jehmlich
contact affiliation	Helmholtz-Centre for Environmental Research - UFZ
contact email	nico.jehmlich@ufz.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/01/PXD005126

PRIDE project URI

• PRIDE
  1. PXD005126
     1. Label: PRIDE project
     2. Name: Proteome data on the microbial microbiome of grasshopper feces