PXD005100 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | DREX proteome analysis for spectral library |
Description | In order to prepare a spectral library for data-indepentend acquisition mass spectrometry studies, we try to cover as many proteins from Drosophila melanogaster embryonic protein extracts. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:32:51.461.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Andreas Schmidt |
SpeciesList | scientific name: Drosophila melanogaster (Fruit fly); NCBI TaxID: 7227; |
ModificationList | monohydroxylated residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | TripleTOF 6600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-10-05 01:26:31 | ID requested | |
1 | 2019-02-25 01:32:08 | announced | |
⏵ 2 | 2024-10-22 04:32:57 | announced | 2024-10-22: Updated project metadata. |
Publication List
10.1021/acs.jproteome.8b00819; |
10.1074/mcp.M115.053553; |
V, ö, lker-Albert MC, Pusch MC, Fedisch A, Schilcher P, Schmidt A, Imhof A, A Quantitative Proteomic Analysis of In Vitro Assembled Chromatin. Mol Cell Proteomics, 15(3):945-59(2016) [pubmed] |
Ammar C, Berchtold E, Csaba G, Schmidt A, Imhof A, Zimmer R, Multi-Reference Spectral Library Yields Almost Complete Coverage of Heterogeneous LC-MS/MS Data Sets. J Proteome Res, 18(4):1553-1566(2019) [pubmed] |
Keyword List
curator keyword: Technical, Biological |
submitter keyword: Drosophila embryo proteome, fragmentation pattern, spectral library |
Contact List
Axel Imhof |
contact affiliation | Protein Analysis Unit ZfP LMU Munich BioMedical Center Grosshaderner Strasse 9 82152 Planegg-Martinsried Tel. +49 89 2180 75420 |
contact email | imhof@lmu.de |
lab head | |
Andreas Schmidt |
contact affiliation | CECAD, University of Cologne, AG Krüger |
contact email | A.Schmidt@med.uni-muenchen.de |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2019/02/PXD005100 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005100
- Label: PRIDE project
- Name: DREX proteome analysis for spectral library