PXD005065

PXD005065 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	FFPE LFQ proteomics of Human Cerebral Development and CMV Encephalitis Fetal Brains
Description	We utilize a rapid shotgun FFPE LFQ MS method to profile four regions of developing human cerebrum. Regions encompass neural precursor rich ventricular zones as well as intermediate and subplate and cortex regions accross human development from gestational weeks 16-36. Proteome signatures of the four fetal brain regions were determined using statistical tests and CMV-infected fetal brain encephalitis was analyzed to determine the region-specific effects of this neurodevelopmental disorder.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:33:00.450.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ugljesa Djuric
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	phosphorylated residue; acetylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-09-29 06:03:55	ID requested
1	2017-07-14 00:59:06	announced
⏵ 2	2024-10-22 04:33:01	announced	2024-10-22: Updated project metadata.

Publication List

Djuric U, Rodrigues DC, Batruch I, Ellis J, Shannon P, Diamandis P, Spatiotemporal Proteomic Profiling of Human Cerebral Development. Mol Cell Proteomics, 16(9):1548-1562(2017) [pubmed]
10.1074/mcp.M116.066274;

Djuric U, Rodrigues DC, Batruch I, Ellis J, Shannon P, Diamandis P, Spatiotemporal Proteomic Profiling of Human Cerebral Development. Mol Cell Proteomics, 16(9):1548-1562(2017) [pubmed]

10.1074/mcp.M116.066274;

Keyword List

curator keyword: Biological, Biomedical
submitter keyword: shotgun proteomics, encephalitis,fetal brain

curator keyword: Biological, Biomedical

submitter keyword: shotgun proteomics, encephalitis,fetal brain

Contact List

Eleftherios Diamandis
contact affiliation	Mount Sinai Hospital (Lab Head)
contact email	Eleftherios.Diamandis@sinaihealthsystem.ca
lab head
Ugljesa Djuric
contact affiliation	Mt. Sinai Hospital
contact email	ugljesa.djuric@mail.utoronto.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005065
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005065

PRIDE project URI

Repository Record List

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