PXD005065 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | FFPE LFQ proteomics of Human Cerebral Development and CMV Encephalitis Fetal Brains |
Description | We utilize a rapid shotgun FFPE LFQ MS method to profile four regions of developing human cerebrum. Regions encompass neural precursor rich ventricular zones as well as intermediate and subplate and cortex regions accross human development from gestational weeks 16-36. Proteome signatures of the four fetal brain regions were determined using statistical tests and CMV-infected fetal brain encephalitis was analyzed to determine the region-specific effects of this neurodevelopmental disorder. |
HostingRepository | PRIDE |
AnnounceDate | 2024-10-22 |
AnnouncementXML | Submission_2024-10-22_04:33:00.450.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Ugljesa Djuric |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | phosphorylated residue; acetylated residue; iodoacetamide derivatized residue |
Instrument | Q Exactive |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2016-09-29 06:03:55 | ID requested | |
1 | 2017-07-14 00:59:06 | announced | |
⏵ 2 | 2024-10-22 04:33:01 | announced | 2024-10-22: Updated project metadata. |
Publication List
Djuric U, Rodrigues DC, Batruch I, Ellis J, Shannon P, Diamandis P, Spatiotemporal Proteomic Profiling of Human Cerebral Development. Mol Cell Proteomics, 16(9):1548-1562(2017) [pubmed] |
10.1074/mcp.M116.066274; |
Keyword List
curator keyword: Biological, Biomedical |
submitter keyword: shotgun proteomics, encephalitis,fetal brain |
Contact List
Eleftherios Diamandis |
contact affiliation | Mount Sinai Hospital (Lab Head) |
contact email | Eleftherios.Diamandis@sinaihealthsystem.ca |
lab head | |
Ugljesa Djuric |
contact affiliation | Mt. Sinai Hospital |
contact email | ugljesa.djuric@mail.utoronto.ca |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD005065 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD005065
- Label: PRIDE project
- Name: FFPE LFQ proteomics of Human Cerebral Development and CMV Encephalitis Fetal Brains