PXD004984

PXD004984 is an original dataset announced via ProteomeXchange.

Title	Quantitative proteomic analysis of Murine Norovirus infected BV-2 cells (v2)
Description	SILAC-labelling analysis of murine BV-2 cells infected at high multiplicity of infection (10 TCID50/cell) and harvested at 4h or 9h post-infection. Represents the first quantitative proteomics analysis of norovirus-infected cells. A paired AP-MS dataset investigates the effects of MNV infection on eukaryotic initiation factor (eIF) complex formation with this dataset providing data on the overall abundance of eIF components in infected cells. This is a reanalysis of an earlier dataset (PXD004015) performed in Maxquant (v1.5.5.1).
HostingRepository	PRIDE
AnnounceDate	2017-01-17
AnnouncementXML	Submission_2017-01-17_14:01:15.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Edward Emmott
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	6x(13)C labeled residue
Instrument	LTQ Orbitrap Velos

Revision	Datetime	Status	ChangeLog Entry
0	2016-09-16 02:29:34	ID requested
⏵ 1	2017-01-17 14:01:16	announced

Emmott E, Sorgeloos F, Caddy SL, Vashist S, Sosnovtsev S, Lloyd R, Heesom K, Locker N, Goodfellow I, Norovirus-Mediated Modification of the Translational Landscape via Virus and Host-Induced Cleavage of Translation Initiation Factors. Mol Cell Proteomics, 16(4 suppl 1):S215-S229(2017) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: Mouse, Norovirus, MNV, SILAC, eIF, translation, initiation, virus

Ian Goodfellow
contact affiliation	University of Cambridge, DIvision of Virology, Department of Pathology.
contact email	ig299@cam.ac.uk
lab head
Edward Emmott
contact affiliation	University of Cambridge
contact email	ee273@cam.ac.uk
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/01/PXD004984

PRIDE project URI

• PRIDE
  1. PXD004984
     1. Label: PRIDE project
     2. Name: Quantitative proteomic analysis of Murine Norovirus infected BV-2 cells (v2)