PXD004962

PXD004962 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Quantitative Shotgun Proteomics Unveils Candidate Novel Oesophageal Adenocarcinoma-Specific Proteins
Description	Selective markers are needed for earlier diagnosis, optimal staging and treatment of oesophageal adenocarcinoma. This quantitative shotgun proteomic study used patient-matched fresh frozen tissue samples of OAC, normal oesophagus and normal stomach.
HostingRepository	PRIDE
AnnounceDate	2017-03-31
AnnouncementXML	Submission_2017-03-31_01:16:00.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Robert O'Neill
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-09-14 01:46:13	ID requested
⏵ 1	2017-03-31 01:16:01	announced

Publication List

O'Neill JR, Pak HS, Pairo-Castineira E, Save V, Paterson-Brown S, Nenutil R, Vojt, ě, š, ek B, Overton I, Scherl A, Hupp TR, Quantitative Shotgun Proteomics Unveils Candidate Novel Esophageal Adenocarcinoma (EAC)-specific Proteins. Mol Cell Proteomics, 16(6):1138-1150(2017) [pubmed]

O'Neill JR, Pak HS, Pairo-Castineira E, Save V, Paterson-Brown S, Nenutil R, Vojt, ě, š, ek B, Overton I, Scherl A, Hupp TR, Quantitative Shotgun Proteomics Unveils Candidate Novel Esophageal Adenocarcinoma (EAC)-specific Proteins. Mol Cell Proteomics, 16(6):1138-1150(2017) [pubmed]

Keyword List

curator keyword: Biological, Biomedical
submitter keyword: Oesophageal Adenocarcinoma, TMT, shotgun proteomics

curator keyword: Biological, Biomedical

submitter keyword: Oesophageal Adenocarcinoma, TMT, shotgun proteomics

Contact List

Alexander Scherl
contact affiliation	University of Geneva
contact email	alexander.scherl@etat.ge.ch
lab head
Robert O'Neill
contact affiliation	University of Edinburgh
contact email	roneill1@staffmail.ed.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/03/PXD004962
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/03/PXD004962

PRIDE project URI

Repository Record List

[ + ]