PXD004936

PXD004936 is an original dataset announced via ProteomeXchange.

Title	Comprehensive metaboproteomics of Burkitt’s and diffuse large B-cell lymphoma cell lines and primary tumor tissues
Description	Comparative proteome analysis of BL and DLBCL cell lines, cryopreserved and formalin-fixed paraffin-embedded (FFPE) primary tumor specimens by SWATH-MS.
HostingRepository	PRIDE
AnnounceDate	2017-02-08
AnnouncementXML	Submission_2017-02-08_06:19:27.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Philipp Schwarzfischer
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	iodoacetamide derivatized residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2016-09-12 03:09:26	ID requested
⏵ 1	2017-02-08 06:19:29	announced

Schwarzfischer P, Reinders J, Dettmer K, Kleo K, Dimitrova L, Hummel M, Feist M, Kube D, Szczepanowski M, Klapper W, Taruttis F, Engelmann JC, Spang R, Gronwald W, Oefner PJ, Comprehensive Metaboproteomics of Burkitt's and Diffuse Large B-Cell Lymphoma Cell Lines and Primary Tumor Tissues Reveals Distinct Differences in Pyruvate Content and Metabolism. J Proteome Res, 16(3):1105-1120(2017) [pubmed]

curator keyword: Biomedical

submitter keyword: BL, DLBCL, SWATH-MS, FFPE, cell lines, cryopreserved

Prof. Dr. Peter Oefner
contact affiliation	Chair of the Department of Functional Genomics Institute of Functional Genomics Functional Genomics Group University of Regensburg Am Biopark 9 93053 Regensburg, Germany
contact email	Peter.Oefner@klinik.uni-regensburg.de
lab head
Philipp Schwarzfischer
contact affiliation	University of Regensburg
contact email	schwarzfischer@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/02/PXD004936

PRIDE project URI

• PRIDE
  1. PXD004936
     1. Label: PRIDE project
     2. Name: Comprehensive metaboproteomics of Burkitt’s and diffuse large B-cell lymphoma cell lines and primary tumor tissues