PXD004915

PXD004915 is an original dataset announced via ProteomeXchange.

Title	RPE-1 and RPE-1 trisomic AHA p-c and steady state data
Description	We developed a pulse-chase method in where fully SILAC (heavy, medium-heavy and Light) labelled cells were pulsed with Azidohomoalanine (AHA) and then chased for different length of times. In addition, steady state protein levels comparing the RPE- and RPE-1 trisomic cells by standard SILAC labeling was also acquired. These datasets contain data for the human RPE-1 and RPE-1 trisomic cell lines.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:31:59.255.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Erik McShane
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	monohydroxylated residue; acetylated residue; deamidated residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-09-11 23:53:17	ID requested
1	2016-10-06 04:51:02	announced
2	2016-11-21 05:01:28	announced	Updated publication reference for PubMed record(s): 27720452.
3	2017-06-20 05:44:19	announced	Updated project metadata.
4	2017-10-24 01:46:58	announced	Updated project metadata.
⏵ 5	2024-10-22 04:32:07	announced	2024-10-22: Updated project metadata.

10.1016/j.cell.2016.09.015;

McShane E, Sin C, Zauber H, Wells JN, Donnelly N, Wang X, Hou J, Chen W, Storchova Z, Marsh JA, Valleriani A, Selbach M, Kinetic Analysis of Protein Stability Reveals Age-Dependent Degradation. Cell, 167(3):803-815.e21(2016) [pubmed]

curator keyword: Biological

submitter keyword: Human, Aneuploidy, PRE-1

Matthias Selbach
contact affiliation	Max Delbrueck centrum, Berlin Charité, Berlin
contact email	matthias.selbach@mdc-berlin.de
lab head
Erik McShane
contact affiliation	Max-Delbrück-Centrum für Molekulare Medizin (MDC)
contact email	erik.mcshane@mdc-berlin.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/10/PXD004915

PRIDE project URI

• PRIDE
  1. PXD004915
     1. Label: PRIDE project
     2. Name: RPE-1 and RPE-1 trisomic AHA p-c and steady state data