PXD004839

PXD004839 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	TIG-3 quantification of metabolic enzymes set11
Description	The expression levels of metabolic enzymes were estimated by MRM analysis with internal standard recombinant proteins. The analysis is performed in human diploid fibroblasts, TIG-3 cells and their derived cell lines (TS, TSM, and TSR). TIG-3 TS is immortalized cells by expressing hTERT and SV40 largeT and smallT antigens (SV40 ER). TIG3 TSM and TSR cells were transformed lines by cMyc or H-RAS(G12V) in TERT/SV40 expressing TIG-3, respectively.
HostingRepository	jPOST
AnnounceDate	2016-12-03
AnnouncementXML	Submission_2022-09-18_03:39:07.674.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Masaki Matsumoto
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	mTRAQ light reporter+balance reagent N6-acylated lysine; mTRAQ light reporter+balance reagent acylated N-terminal; mTRAQ light reporter+balance reagent O4'-acylated tyrosine; S-carboxamidomethyl-L-cysteine; mTRAQ:13C(3)15N(1); mTRAQ:13C(6)15N(2); mTRAQ:13C(3)15N(1)
Instrument	Q TRAP

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-08-17 01:52:24	ID requested
1	2016-12-02 16:18:46	announced
2	2017-08-08 15:51:40	announced	Updated PubMed.
3	2018-09-18 23:15:09	announced	Updated CV, FTP location and Modification list.
4	2021-02-04 17:26:11	announced	2021-02-04: Updated FTP location.
⏵ 5	2022-09-18 03:39:08	announced	2022-09-18: Updated FTP location.

Publication List

Matsumoto M, Matsuzaki F, Oshikawa K, Goshima N, Mori M, Kawamura Y, Ogawa K, Fukuda E, Nakatsumi H, Natsume T, Fukui K, Horimoto K, Nagashima T, Funayama R, Nakayama K, Nakayama KI, A large-scale targeted proteomics assay resource based on an in vitro human proteome. Nat Methods, 14(3):251-258(2017) [pubmed]

Matsumoto M, Matsuzaki F, Oshikawa K, Goshima N, Mori M, Kawamura Y, Ogawa K, Fukuda E, Nakatsumi H, Natsume T, Fukui K, Horimoto K, Nagashima T, Funayama R, Nakayama K, Nakayama KI, A large-scale targeted proteomics assay resource based on an in vitro human proteome. Nat Methods, 14(3):251-258(2017) [pubmed]

Keyword List

submitter keyword: metabolism, absolute quantification, MRM

submitter keyword: metabolism, absolute quantification, MRM

Contact List

Masaki Matsumoto
lab head
Masaki Matsumoto
contact affiliation	Div. Proteomics, Med. Inst. Bioreg., Kyushu Univ.
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000179/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST000179/