PXD004712

PXD004712 is an original dataset announced via ProteomeXchange.

Title	Chlorella sp. FC2 IITG temporal nitrogen-starvation LC-MSMS
Description	Proteomics study in non-model alga Chlorella FC2 IITG (FC2) challenged with nitrogen starvation for 120 h. Three different nitrogen starvation time-points 40 h, 88 h and 120 h was compared with 0 h (nitrogen sufficient condition). Comparative proteomics analysis was performed using 4-plex isobaric tags for relative and absolute quantification (iTRAQ) labelling strategy, followed by chromatographic separation and final generation of tandem mass spectrometry (MS/MS) spectra of tryptic digested peptides on Q-TOF mass spectrometer.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:31:16.120.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vineeta Rai
SpeciesList	scientific name: Chlorella sp. FC2 IITG; NCBI TaxID: 1218707;
ModificationList	iodoacetamide derivatized residue
Instrument	Agilent instrument model

Revision	Datetime	Status	ChangeLog Entry
0	2016-08-03 06:16:49	ID requested
1	2018-10-26 14:54:16	announced
⏵ 2	2024-10-22 04:31:18	announced	2024-10-22: Updated project metadata.

10.1038/srep45732;

Rai V, Muthuraj M, Gandhi MN, Das D, Srivastava S, Real-time iTRAQ-based proteome profiling revealed the central metabolism involved in nitrogen starvation induced lipid accumulation in microalgae. Sci Rep, 7():45732(2017) [pubmed]

curator keyword: Biological

submitter keyword: LC-MSMS, temporal study, lipid induction, nitrogen starvation,Chlorella sp.

Sanjeeva Srivastava
contact affiliation	Proteomics lab, Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay
contact email	sanjeeva@iitb.ac.in
lab head
Vineeta Rai
contact affiliation	CSIR-CDRI
contact email	vineetaiitbombay@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/10/PXD004712

PRIDE project URI

• PRIDE
  1. PXD004712
     1. Label: PRIDE project
     2. Name: Chlorella sp. FC2 IITG temporal nitrogen-starvation LC-MSMS