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PXD004691

PXD004691 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleComparison of FFPE and fresh frozen prostate tissues using PCT SWATH
DescriptionWe compared the proteomes of FFPE and fresh frozen tissues (both tumorous and non-tumorous) from 16 prostate cancer patients using pressure cycling technology and SWATH-MS.
HostingRepositoryPRIDE
AnnounceDate2024-10-22
AnnouncementXMLSubmission_2024-10-22_04:34:15.295.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterTiannan Guo
SpeciesList scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationListcarbamoylated residue; monohydroxylated residue
InstrumentTripleTOF 5600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02016-08-01 03:47:34ID requested
12019-10-07 14:29:19announced
22024-10-22 04:34:18announced2024-10-22: Updated project metadata.
Publication List
10.1002/1878-0261.12570;
Zhu Y, Weiss T, Zhang Q, Sun R, Wang B, Yi X, Wu Z, Gao H, Cai X, Ruan G, Zhu T, Xu C, Lou S, Yu X, Gillet L, Blattmann P, Saba K, Fankhauser CD, Schmid MB, Rutishauser D, Ljubicic J, Christiansen A, Fritz C, Rupp NJ, Poyet C, Rushing E, Weller M, Roth P, Haralambieva E, Hofer S, Chen C, Jochum W, Gao X, Teng X, Chen L, Zhong Q, Wild PJ, Aebersold R, Guo T, High-throughput proteomic analysis of FFPE tissue samples facilitates tumor stratification. Mol Oncol, 13(11):2305-2328(2019) [pubmed]
Keyword List
curator keyword: Biological, Biomedical
submitter keyword: prostate cancer
PCT-SWATH
FFPE
Contact List
Ruedi Aebersold
contact affiliationETH Zurich
contact emailaebersold@imsb.biol.ethz.ch
lab head
Tiannan Guo
contact affiliationWestlake University
contact emailtiannan.guo@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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