PXD004683

PXD004683 is an original dataset announced via ProteomeXchange.

Title	Comparison of Lung Cancer Proteome Profiles 2: TMT
Description	The goal of this project is to compare label free quantification, chemical labeling with tandem mass tags, and data independent acquisition discovery proteomics approaches using lung squamous cell carcinomas and adjacent lung tissues.
HostingRepository	PRIDE
AnnounceDate	2017-02-16
AnnouncementXML	Submission_2017-02-16_06:25:47.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD004683
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	John Koomen
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-07-29 07:38:59	ID requested
⏵ 1	2017-02-16 06:25:48	announced

Stewart PA, Fang B, Slebos RJ, Zhang G, Borne AL, Fellows K, Teer JK, Chen YA, Welsh E, Eschrich SA, Haura EB, Koomen JM, Relative protein quantification and accessible biology in lung tumor proteomes from four LC-MS/MS discovery platforms. Proteomics, 17(6):(2017) [pubmed]

curator keyword: Technical, Biological, Biomedical

submitter keyword: Human, Lung Cancer, LC-MS/MS, bRPLC fractionation, discovery proteomics

John Koomen
contact affiliation	Molecular Oncology Chemical Biology and Molecular Medicine Moffitt Cancer Center
contact email	john.koomen@moffitt.org
lab head
John Koomen
contact affiliation	Moffitt Cancer Center
contact email	john.koomen@moffitt.org
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/02/PXD004683

PRIDE project URI

• PRIDE
  1. PXD004683
     1. Label: PRIDE project
     2. Name: Comparison of Lung Cancer Proteome Profiles 2: TMT