PXD004678

PXD004678 is an original dataset announced via ProteomeXchange.

Title	Proteomics of human dendritic cell subsets
Description	We exploited label-free quantitative mass spectrometry to compare primary human blood Dendritic cells (DCs) subsets protein expression to identify new markers. Subsets distinguished are: Plasmacytoid DCs (pDC) and BDCA3+ and CD1c+ myeloid DCs and CD16+ monocytes. The dendritic cells were analyzed by LC-MS/MS and processed by MaxQuant for identification and LFQ quantification.
HostingRepository	PRIDE
AnnounceDate	2016-09-27
AnnouncementXML	Submission_2016-09-27_03:52:48.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Kuntal worah
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ FT

Revision	Datetime	Status	ChangeLog Entry
0	2016-07-29 03:11:31	ID requested
⏵ 1	2016-09-27 03:52:50	announced

Worah K, Mathan TSM, Vu Manh TP, Keerthikumar S, Schreibelt G, Tel J, Duiveman-de Boer T, Sk, ö, ld AE, van Spriel AB, de Vries IJM, Huynen MA, Wessels HJ, Gloerich J, Dalod M, Lasonder E, Figdor CG, Buschow SI, Proteomics of Human Dendritic Cell Subsets Reveals Subset-Specific Surface Markers and Differential Inflammasome Function. Cell Rep, 16(11):2953-2966(2016) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: Dendritic cells, Plasmacytoid DCs (pDCs), BDCA3+, CD1c+ myeloid DCs, CD16+ monocytes, MS/MS (LC-MS/MS), LFQ

Edwin Lasonder
contact affiliation	School of Biomedical and Healthcare Sciences B427 Portland Square Plymouth University Drake Circus, Plymouth Devon PL4 8AA United Kingdom
contact email	edwin.lasonder@plymouth.ac.uk
lab head
Kuntal worah
contact affiliation	Radboudumc
contact email	worah.kuntal@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/09/PXD004678

PRIDE project URI

• PRIDE
  1. PXD004678
     1. Label: PRIDE project
     2. Name: Proteomics of human dendritic cell subsets