PXD004638

PXD004638 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	S. aciditrophicus
Description	We utilize a harsh mass-spectrometry compatible sample preparation method (eFASP), and label-free quantitative mass spectrometry, to collect a comprehensive inventory of proteins and the degree of differential regulation based on growth condition
HostingRepository	PRIDE
AnnounceDate	2017-07-28
AnnouncementXML	Submission_2017-07-28_09:00:05.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hong Nguyen
SpeciesList	scientific name: Syntrophus aciditrophicus; NCBI TaxID: 316277;
ModificationList	monohydroxylated residue
Instrument	Synapt MS

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-07-21 07:57:54	ID requested
⏵ 1	2017-07-28 09:00:07	announced

Publication List

James KL, R, í, os-Hern, á, ndez LA, Wofford NQ, Mouttaki H, Sieber JR, Sheik CS, Nguyen HH, Yang Y, Xie Y, Erde J, Rohlin L, Karr EA, Loo JA, Ogorzalek Loo RR, Hurst GB, Gunsalus RP, Szweda LI, McInerney MJ, Pyrophosphate-Dependent ATP Formation from Acetyl Coenzyme A in Syntrophus aciditrophicus, a New Twist on ATP Formation. mBio, 7(4):(2016) [pubmed]

James KL, R, í, os-Hern, á, ndez LA, Wofford NQ, Mouttaki H, Sieber JR, Sheik CS, Nguyen HH, Yang Y, Xie Y, Erde J, Rohlin L, Karr EA, Loo JA, Ogorzalek Loo RR, Hurst GB, Gunsalus RP, Szweda LI, McInerney MJ, Pyrophosphate-Dependent ATP Formation from Acetyl Coenzyme A in Syntrophus aciditrophicus, a New Twist on ATP Formation. mBio, 7(4):(2016) [pubmed]

Keyword List

curator keyword: Biological
submitter keyword: syntrophic bacteria, Syntrophus aciditrophicus, crotonate, proteome

curator keyword: Biological

submitter keyword: syntrophic bacteria, Syntrophus aciditrophicus, crotonate, proteome

Contact List

Rachel Loo
contact affiliation	UCLA
contact email	rloo@mednet.ucla.edu
lab head
Hong Nguyen
contact affiliation	UCLA
contact email	hhn@ucla.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD004638
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/07/PXD004638

PRIDE project URI

Repository Record List

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