PXD004538

PXD004538 is an original dataset announced via ProteomeXchange.

Title	Quantitative metaproteomics highlight the metabolic contributions of uncultured phylotypes in a thermophilic anaerobic digester
Description	In this study, we used multiple meta-omic approaches to characterize the microbial community and the active metabolic pathways of a stable industrial biogas reactor operating at thermophilic temperatures (60°C) and elevated levels of free ammonia (367 mg NH3-N/L).
HostingRepository	PRIDE
AnnounceDate	2017-06-30
AnnouncementXML	Submission_2017-06-30_02:10:56.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Magnus Arntzen
SpeciesList	scientific name: Coprothermobacter; NCBI TaxID: 68335; scientific name: Methanosaeta; NCBI TaxID: 2222;
ModificationList	2-pyrrolidone-5-carboxylic acid (Gln); monohydroxylated residue; acetylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2016-07-11 01:37:23	ID requested
⏵ 1	2017-06-30 02:10:58	announced

Hagen LH, Frank JA, Zamanzadeh M, Eijsink VGH, Pope PB, Horn SJ, Arntzen M Ø, Quantitative Metaproteomics Highlight the Metabolic Contributions of Uncultured Phylotypes in a Thermophilic Anaerobic Digester. Appl Environ Microbiol, 83(2):(2017) [pubmed]

curator keyword: Technical

submitter keyword: metaproteomics, SAOB, biogas reactor, Wood Ljungdal pathway

Vincent Eijsink
contact affiliation	Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences P. O. Box 5003 N-1432 Ås Norway
contact email	vincent.eijsink@nmbu.no
lab head
Magnus Arntzen
contact affiliation	Norwegian University of Life Sciences
contact email	magnus.arntzen@nmbu.no
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/06/PXD004538

PRIDE project URI

• PRIDE
  1. PXD004538
     1. Label: PRIDE project
     2. Name: Quantitative metaproteomics highlight the metabolic contributions of uncultured phylotypes in a thermophilic anaerobic digester