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PXD004501

DataSet Summary

  • HostingRepository: PRIDE
  • AnnounceDate: 2018-04-16
  • AnnouncementXML: Submission_2018-04-16_03:41:20.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Peer-reviewed dataset
  • DatasetOrigin: Original data
  • RepositorySupport: Unsupported dataset by repository
  • PrimarySubmitter: Dohyun Han
  • Title: Quantitative proteomic analysis of human malignant ascites
  • Description: Ascites is a valuable source of cancer biomarkers, because it contains a variety of secreted and shed proteins from cancerous cells. Conversely, most proteomic studies on ascites have focused on ovarian cancer and provided insufficient depth for biomarker discovery. Further, no proteomic analysis of ascites from gastric cancer has been reported. To this end, we profiled the human ascites proteome to obtain a pool of biomarker candidates using comprehensive proteomic strategies. Subsequently, label-free quantitation was performed to compare the abundance of proteins between benign disease and gastric cancer patients.
  • SpeciesList: scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
  • ModificationList: monohydroxylated residue; iodoacetamide derivatized residue
  • Instrument: Q Exactive

Dataset History

VersionDatetimeStatusChangeLog Entry
02016-07-01 08:17:09ID requested
12018-04-16 03:41:21announced

Publication List

  1. Jin J, Son M, Kim H, Kim H, Kong SH, Kim HK, Kim Y, Han D, Comparative proteomic analysis of human malignant ascitic fluids for the development of gastric cancer biomarkers. Clin Biochem, ():(2018) [pubmed]

Keyword List

  1. curator keyword: Biological, Biomedical
  2. submitter keyword: Quantitative proteomics, Malignant Ascites, Label-free quantitation, gastric cancer

Contact List

    Dohyun Han
    • contact affiliation: Biomedical Research Institute ,Seoul National University Hospital
    • contact email: hdh03@snu.ac.kr
    • lab head:
    Dohyun Han
    • contact affiliation: Colleage of medicine
    • contact email: hdh03@snu.ac.kr
    • dataset submitter:

Full Dataset Link List

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  2. PRIDE project URI
Repository Record List
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