PXD004471

PXD004471 is an original dataset announced via ProteomeXchange.

Title	Identification of HLA-B*57:01-restricted endogenous and HIV epitopes
Description	A novel modified HLA-B*57:01-restricted epitope was identified in one of the reversed-phase fractions following immunoaffinity purification of HLA-peptide complexes from C1R cells expressing HIV envelope protein. Also includes six immunopeptidome datasets from several B57 and env transfected cell lysates.
HostingRepository	PRIDE
AnnounceDate	2018-02-19
AnnouncementXML	Submission_2018-02-19_03:10:22.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Sri Ramarathinam
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: HIV-1 M:B_HXB2R; NCBI TaxID: 11706;
ModificationList	L-kynurenine; deamidated residue
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2016-06-30 01:54:08	ID requested
⏵ 1	2018-02-19 03:10:24	announced

Ramarathinam SH, Gras S, Alcantara S, Yeung AWS, Mifsud NA, Sonza S, Illing PT, Glaros EN, Center RJ, Thomas SR, Kent SJ, Ternette N, Purcell DFJ, Rossjohn J, Purcell AW, Identification of Native and Posttranslationally Modified HLA-B*57:01-Restricted HIV Envelope Derived Epitopes Using Immunoproteomics. Proteomics, 18(12):e1700253(2018) [pubmed]

curator keyword: Biological, Biomedical

submitter keyword: HLA-B*57:01, immunopeptidomics, kynurenine, HIV envelope

Anthony Purcell
contact affiliation	Deputy Head (Research), Department of Biochemistry and Molecular Biology Head Immunoproteomics Laboratory Monash University, Clayton Campus Clayton 3800 Victoria Australia
contact email	anthony.purcell@monash.edu
lab head
Sri Ramarathinam
contact affiliation	Monash University
contact email	sri.ramarathinam@monash.edu
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/02/PXD004471

PRIDE project URI

• PRIDE
  1. PXD004471
     1. Label: PRIDE project
     2. Name: Identification of HLA-B*57:01-restricted endogenous and HIV epitopes