PXD004453

PXD004453 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Comparison of Protein Extraction Methods in Tendon Mass Spectrometry Analysis
Description	Tendons play a fundamental role in the musculoskeletal system and locomotion by transferring forces generated from muscles to the skeleton. Tendon injuries can occur due to sports related incidents, as a result of trauma to overuse or during disease or ageing. Using proteomic techniques tendon protein profiles could be defined under different conditions. The aim of this study was to optimise tendon sample preparation for mass spectrometry analysis, which will be valuable for future tendon studies.
HostingRepository	PRIDE
AnnounceDate	2018-07-05
AnnouncementXML	Submission_2018-07-05_03:16:13.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD004453
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Yalda Ashraf
SpeciesList	scientific name: Equus caballus (Horse); NCBI TaxID: 9796;
ModificationList	Oxidation; Carbamidomethyl
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2016-06-28 02:11:50	ID requested
⏵ 1	2018-07-05 03:16:15	announced

Publication List

Ashraf Kharaz Y, Zamboulis D, Sanders K, Comerford E, Clegg P, Peffers M, Comparison between chaotropic and detergent-based sample preparation workflow in tendon for mass spectrometry analysis. Proteomics, 17(13-14):(2017) [pubmed]

Ashraf Kharaz Y, Zamboulis D, Sanders K, Comerford E, Clegg P, Peffers M, Comparison between chaotropic and detergent-based sample preparation workflow in tendon for mass spectrometry analysis. Proteomics, 17(13-14):(2017) [pubmed]

Keyword List

curator keyword: Technical, Biological
submitter keyword: Tendon, LC-MS/MS

curator keyword: Technical, Biological

submitter keyword: Tendon, LC-MS/MS

Contact List

Mandy J Peffers
contact affiliation	Musculoskeletal Biology, Institute of Ageing and Chronic Disease, University of Liverpool
contact email	peffs@liverpool.ac.uk
lab head
Yalda Ashraf
contact affiliation	University of Liverpool
contact email	yalda@liverpool.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD004453
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2018/07/PXD004453

PRIDE project URI

Repository Record List

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